RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 HRH2P25021 359 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 ADORA2BP29275 332 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 HOXC13P31276 330 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 CSTF2P33240 577 aaKnown RBP eCLIP2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 S100A3P33764 101 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 CD68P34810 354 aaPredicted RBP2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 SHMT2P34897 504 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 CA8P35219 290 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 GGT2P36268 569 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 POLR2IP36954 125 aaKnown RBP2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 ETFBP38117 255 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 PTGER3P43115 390 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 MAPK9P45984 424 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 YAP1P46937 504 aaKnown RBP2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 SLC9A3P48764 834 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 RGS6P49758 472 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 GZMKP49863 264 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 SEPHS1P49903 392 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 ETV1P50549 477 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 CLCN3P51790 818 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 MAPK12P53778 367 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 CACNB3P54284 484 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 PNLIPRP1P54315 467 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 RAG2P55895 527 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 SOX10P56693 466 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 WNT3AP56704 352 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 DAOAP59103 153 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 OSTNP61366 133 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 NCS1P62166 190 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 BTG1P62324 171 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 PPP3R1P63098 170 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 SH3BP2P78314 561 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 S100A12P80511 92 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 IFITM2Q01629 132 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 SP4Q02446 784 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 RBBP4Q09028 425 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 ADIGQ0VDE8 80 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 SCRN3Q0VDG4 424 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 FAPQ12884 760 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 NPRL3Q12980 569 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 SLC13A2Q13183 592 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 CAMK2GQ13555 558 aaPredicted RBP2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 TP53BP2Q13625 1128 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 DGCR6Q14129 220 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 TTLL4Q14679 1199 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 NCF4Q15080 339 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 PON2Q15165 354 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 NR6A1Q15406 480 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 ZBTB6Q15916 424 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 RBBP7Q16576 425 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 PPP1R3AQ16821 1122 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 AAK1Q2M2I8 961 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 SOWAHAQ2M3V2 549 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 AP5B1Q2VPB7 878 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 PARP15Q460N3 678 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 SEZ6Q53EL9 994 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 KLHL22Q53GT1 634 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 ALFQ53S48 1182 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 RUNDC3AQ59EK9 446 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 RABL3Q5HYI8 236 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 COLEC12Q5KU26 742 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 LDLRAP1Q5SW96 308 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 CELF3Q5SZQ8 465 aaKnown RBP2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 LRIF1Q5T3J3 769 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 GPR158Q5T848 1215 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 ANXA8L1Q5VT79 327 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 C9orf57Q5W0N0 161 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 TRIQKQ629K1 86 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 MAP1SQ66K74 1059 aaPredicted RBP2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 CLEC6AQ6EIG7 209 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 PM20D1Q6GTS8 502 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 TRNP1Q6NT89 227 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 FAM171BQ6P995 826 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 AFTPHQ6ULP2 937 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 CYP20A1Q6UW02 462 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 ARHGAP36Q6ZRI8 547 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 SPATC1Q76KD6 591 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 EIF3MQ7L2H7 374 aaKnown RBP2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 GDPD3Q7L5L3 318 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 ZNF438Q7Z4V0 828 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 MILR1Q7Z6M3 343 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 B3GNT8Q7Z7M8 397 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 DDX53Q86TM3 631 aaKnown RBP2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 ASPGQ86U10 573 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 SLC51AQ86UW1 340 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 METTL23Q86XA0 190 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 RASAL3Q86YV0 1011 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 DENND6AQ8IWF6 608 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 BBS7Q8IWZ6 715 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 RDH10Q8IZV5 341 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 CLIP4Q8N3C7 705 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 CCDC24Q8N4L8 307 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 DTWD1Q8N5C7 304 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 ESX1Q8N693 406 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 NATD1Q8N6N6 113 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 PLA2G15Q8NCC3 412 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 B3GALNT2Q8NCR0 500 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 DUSP18Q8NEJ0 188 aa2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 ZNF548Q8NEK5 533 aaPredicted RBP2.78□□□□□ -1.96
SNORD88.1-201ENST00000408684 FBXO22Q8NEZ5 403 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms