RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 PTPRCAPQ14761 206 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 OASLQ15646 514 aaKnown RBP12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 TTLL9Q3SXZ7 439 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 OTOAQ7RTW8 1153 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 LMNTD2Q8IXW0 634 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 DSELQ8IZU8 1212 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 C19orf47Q8N9M1 422 aaKnown RBP12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 CLEC1AQ8NC01 280 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 OR52K1Q8NGK4 314 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 COG1Q8WTW3 980 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 RAD51AP1Q96B01 352 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 FAM118BQ9BPY3 351 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 GORASP1Q9BQQ3 440 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 SLC25A23Q9BV35 468 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 TLR10Q9BXR5 811 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 CCDC68Q9H2F9 335 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 FAM96AQ9H5X1 160 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 C10orf88Q9H8K7 445 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 FAM114A2Q9NRY5 505 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 NXT1Q9UKK6 140 aaKnown RBP12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 TCAF1Q9Y4C2 921 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 LAMA5O15230 3695 aa12.46□□□□□ -0.42
SNORD88B-201ENST00000408454 ISM1B1AKI9 464 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 VPS4BO75351 444 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 ZNF28P17035 718 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 TPH1P17752 444 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 FOXN2P32314 431 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 MSLNQ13421 630 aaPredicted RBP12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 GPR19Q15760 415 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 DUS1LQ6P1R4 473 aaKnown RBP12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 SYTL1Q8IYJ3 562 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 SLC22A15Q8IZD6 547 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 CLDN19Q8N6F1 224 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 GRK7Q8WTQ7 553 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 SKA2Q8WVK7 121 aaPredicted RBP12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 HDAC10Q969S8 669 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 DESI2Q9BSY9 194 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 ETNK1Q9HBU6 452 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 MRM3Q9HC36 420 aaKnown RBP12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 CASS4Q9NQ75 786 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 C5AR2Q9P296 337 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 VPS4AQ9UN37 437 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 PACSIN2Q9UNF0 486 aaPredicted RBP12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 PLCL2Q9UPR0 1127 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 TDRKHQ9Y2W6 561 aaKnown RBP12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 CAPN6Q9Y6Q1 641 aa12.45□□□□□ -0.42
SNORD88B-201ENST00000408454 CCDC162PA2VCL2 907 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 BTN3A1O00481 513 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 PCDH17O14917 1159 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 ZSCAN9O15535 394 aaPredicted RBP12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 SGTAO43765 313 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 CCNDBP1O95273 360 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 GOT2P00505 430 aaKnown RBP12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 ATP5DP30049 168 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 FOLR3P41439 243 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 AP2B1P63010 937 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 DCDP81605 110 aaKnown RBP12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 HSPA14Q0VDF9 509 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 KCNAB1Q14722 419 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 NCF4Q15080 339 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 FAM214AQ32MH5 1076 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 PLEKHS1Q5SXH7 462 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 MEI1Q5TIA1 1274 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 LRRC8EQ6NSJ5 796 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 ZNF517Q6ZMY9 492 aaPredicted RBP12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 TMEM139Q8IV31 216 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 TTC29Q8NA56 475 aaPredicted RBP12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 CALML6Q8TD86 181 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 ANP32BQ92688 251 aaKnown RBP12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 TRAPPC9Q96Q05 1148 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 IFT80Q9P2H3 777 aaPredicted RBP12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 TCFL5Q9UL49 500 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 CELSR3Q9NYQ7 3312 aa12.44□□□□□ -0.42
SNORD88B-201ENST00000408454 SLC5A10A0PJK1 596 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 PABPN1LA6NDY0 278 aaKnown RBP12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 E5RI56 91 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 CD3EAPO15446 510 aaKnown RBP12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 SRPX2O60687 465 aaPredicted RBP12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 VPS26AO75436 327 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 TMEM63AO94886 807 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 ESR1P03372 595 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 CHRM5P08912 532 aaPredicted RBP12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 TPSB2P20231 275 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 RPS3P23396 243 aaKnown RBP eCLIP12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 GDF10P55107 478 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 PRKG2Q13237 762 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 SSPNQ14714 243 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 GRM7Q14831 915 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 TPSAB1Q15661 275 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 RHBDD2Q6NTF9 364 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 PTRH1Q86Y79 214 aaKnown RBP12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 ADGRF3Q8IZF5 1079 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 ENDOVQ8N8Q3 282 aaKnown RBP12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 GPATCH11Q8N954 259 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 ZUFSPQ96AP4 578 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 FKBP10Q96AY3 582 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 ING2Q9H160 280 aa12.43□□□□□ -0.42
SNORD88B-201ENST00000408454 CHST8Q9H2A9 424 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms