RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 CCNFP41002 786 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 ARCN1P48444 511 aaKnown RBP8.8□□□□□ -1
SNORD88A-201ENST00000408314 RAB28P51157 221 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 SESN2P58004 480 aaPredicted RBP8.8□□□□□ -1
SNORD88A-201ENST00000408314 CCZ1BP86790 482 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 CCZ1P86791 482 aaPredicted RBP8.8□□□□□ -1
SNORD88A-201ENST00000408314 HSPA14Q0VDF9 509 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 PRKG2Q13237 762 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 ERV3-1Q14264 604 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 NAA25Q14CX7 972 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 SIX1Q15475 284 aaPredicted RBP8.8□□□□□ -1
SNORD88A-201ENST00000408314 GPR19Q15760 415 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 LACTB2Q53H82 288 aaPredicted RBP8.8□□□□□ -1
SNORD88A-201ENST00000408314 IZUMO3Q5VZ72 239 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 LRRC8BQ6P9F7 803 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 C19orf47Q8N9M1 422 aaKnown RBP8.8□□□□□ -1
SNORD88A-201ENST00000408314 OR5AR1Q8NGP9 310 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 GABPB2Q8TAK5 448 aaPredicted RBP8.8□□□□□ -1
SNORD88A-201ENST00000408314 GRK7Q8WTQ7 553 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 CT55Q8WUE5 264 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 NAT14Q8WUY8 206 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 CLIP3Q96DZ5 547 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 TRAPPC9Q96Q05 1148 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 TCF12Q99081 682 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 DHRS4Q9BTZ2 278 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 TLR10Q9BXR5 811 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 ACTL8Q9H568 366 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 ACTR5Q9H9F9 607 aaPredicted RBP8.8□□□□□ -1
SNORD88A-201ENST00000408314 XAB2Q9HCS7 855 aaKnown RBP8.8□□□□□ -1
SNORD88A-201ENST00000408314 SLC2A6Q9UGQ3 507 aa8.8□□□□□ -1
SNORD88A-201ENST00000408314 TDRKHQ9Y2W6 561 aaKnown RBP8.8□□□□□ -1
SNORD88A-201ENST00000408314 MAGEB16A2A368 324 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 CDC14CA4D256 554 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 MEN1O00255 615 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 PGRMC1O00264 195 aaKnown RBP8.79□□□□□ -1
SNORD88A-201ENST00000408314 KLHL41O60662 606 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 S1PR4O95977 384 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 IGHEP01854 428 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 ESR1P03372 595 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 MLNP12872 115 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 ETS1P14921 441 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 ST6GAL1P15907 406 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 ITGB6P18564 788 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 OGNP20774 298 aaKnown RBP8.79□□□□□ -1
SNORD88A-201ENST00000408314 PTPN4P29074 926 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 GRIA1P42261 906 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 MAGEA6P43360 314 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 PMS2P54278 862 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 BRD3Q15059 726 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 UGT8Q16880 541 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 SLC5A12Q1EHB4 618 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 KIAA0930Q6ICG6 404 aaPredicted RBP8.79□□□□□ -1
SNORD88A-201ENST00000408314 ZNF534Q76KX8 674 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 OTOAQ7RTW8 1153 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 RAB43Q86YS6 212 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 APLFQ8IW19 511 aaPredicted RBP8.79□□□□□ -1
SNORD88A-201ENST00000408314 LMNTD2Q8IXW0 634 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 ADGRF3Q8IZF5 1079 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 PROKR1Q8TCW9 393 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 RAD51AP1Q96B01 352 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 IP6K3Q96PC2 410 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 KIFC1Q9BW19 673 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 AP1M1Q9BXS5 423 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 CHRAC1Q9NRG0 131 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 TREX1Q9NSU2 369 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 IRAK4Q9NWZ3 460 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 SLC39A10Q9ULF5 831 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 TTC7AQ9ULT0 858 aaPredicted RBP8.79□□□□□ -1
SNORD88A-201ENST00000408314 SNX7Q9UNH6 387 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 ICKQ9UPZ9 632 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 FARSAQ9Y285 508 aaKnown RBP8.79□□□□□ -1
SNORD88A-201ENST00000408314 KCNMB2Q9Y691 235 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 PRSS21Q9Y6M0 314 aa8.79□□□□□ -1
SNORD88A-201ENST00000408314 ISM1B1AKI9 464 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 BHMG1C9JSJ3 638 aaPredicted RBP8.78□□□□□ -1
SNORD88A-201ENST00000408314 SUV39H1O43463 412 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 KIF5CO60282 957 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 OR1I1O60431 355 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 GPC4O75487 556 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 OR2B3O76000 313 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 SLCO2B1O94956 709 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 TIAF1O95411 115 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 ZSCAN5DPP0CG00 497 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 UGT2B7P16662 529 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 ATP5DP30049 168 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 PKLRP30613 574 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 CCR7P32248 378 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 CSRP3P50461 194 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 RRADP55042 308 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 ADARP55265 1226 aaKnown RBP8.78□□□□□ -1
SNORD88A-201ENST00000408314 KCNC4Q03721 635 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 KLRB1Q12918 225 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 GPS1Q13098 491 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 GPS2Q13227 327 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 KYNUQ16719 465 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 TTLL9Q3SXZ7 439 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 ZC3H12BQ5HYM0 836 aaKnown RBP8.78□□□□□ -1
SNORD88A-201ENST00000408314 PLEKHS1Q5SXH7 462 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 TCTN3Q6NUS6 607 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 CASC4Q6P4E1 433 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms