RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 THAP10Q9P2Z0 257 aaPredicted RBP24.08■■□□□ 1.45
DNMT3A-206ENST00000406659 EPHX1P07099 455 aa24.08■■□□□ 1.44
DNMT3A-206ENST00000406659 C6P13671 934 aa24.08■■□□□ 1.44
DNMT3A-206ENST00000406659 EPORP19235 508 aa24.08■■□□□ 1.44
DNMT3A-206ENST00000406659 IL12AP29459 219 aa24.08■■□□□ 1.44
DNMT3A-206ENST00000406659 IL12RB1P42701 662 aa24.08■■□□□ 1.44
DNMT3A-206ENST00000406659 GPR1P46091 355 aa24.08■■□□□ 1.44
DNMT3A-206ENST00000406659 CAPRIN1Q14444 709 aaKnown RBP24.08■■□□□ 1.44
DNMT3A-206ENST00000406659 TMEM52BQ4KMG9 183 aa24.08■■□□□ 1.44
DNMT3A-206ENST00000406659 RFTN2Q52LD8 501 aaPredicted RBP24.08■■□□□ 1.44
DNMT3A-206ENST00000406659 TMEM184AQ6ZMB5 413 aa24.08■■□□□ 1.44
DNMT3A-206ENST00000406659 RASGRP3Q8IV61 690 aa24.08■■□□□ 1.44
DNMT3A-206ENST00000406659 PQLC1Q8N2U9 271 aa24.08■■□□□ 1.44
DNMT3A-206ENST00000406659 ZCCHC2Q9C0B9 1178 aaKnown RBP24.08■■□□□ 1.44
DNMT3A-206ENST00000406659 CNOT6Q9ULM6 557 aaKnown RBP24.08■■□□□ 1.44
DNMT3A-206ENST00000406659 DYTNA2CJ06 578 aa24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 KAT7O95251 611 aa24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 PBLDP30039 288 aaPredicted RBP24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 RPL38P63173 70 aaKnown RBP24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 TRIP10Q15642 601 aa24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 CPSF6Q16630 551 aaKnown RBP eCLIP24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 ZXDCQ2QGD7 858 aaPredicted RBP24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 RAET1GQ6H3X3 334 aa24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 ZFAND4Q86XD8 727 aa24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 USP7Q93009 1102 aa24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 PYCR2Q96C36 320 aa24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 ECSITQ9BQ95 431 aa24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 KLHL4Q9C0H6 718 aa24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 EPHX3Q9H6B9 360 aa24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 PRSS16Q9NQE7 514 aa24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 KIAA1549LQ6ZVL6 1849 aa24.07■■□□□ 1.44
DNMT3A-206ENST00000406659 SLC5A10A0PJK1 596 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 ASPDHA6ND91 283 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 FXYD1O00168 92 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 PSIP1O75475 530 aaKnown RBP24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 GNPDA1P46926 289 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 PREPP48147 710 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 HYAL1Q12794 435 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 LPCAT4Q643R3 524 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 NLRP8Q86W28 1048 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 MTFMTQ96DP5 389 aaKnown RBP24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 ERLEC1Q96DZ1 483 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 MYADMQ96S97 322 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 KXD1Q9BQD3 176 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 LRTM1Q9HBL6 345 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 ABCD2Q9UBJ2 740 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 SNX6Q9UNH7 406 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 LRCH1Q9Y2L9 728 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 TRANK1O15050 2925 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 KIF26AQ9ULI4 1882 aaPredicted RBP24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 NME4O00746 187 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 SEC22BO75396 215 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 CATP04040 527 aaKnown RBP24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 PSMC3P17980 439 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 ITPKAP23677 461 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 CASP2P42575 452 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 HMGCS1Q01581 520 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 TLR1Q15399 786 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 LRRC36Q1X8D7 754 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 GGTA1PQ4G0N0 100 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 TIGD2Q4W5G0 525 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 SLC15A3Q8IY34 581 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 RGL4Q8IZJ4 473 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 CXorf40AQ8TE69 158 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 FOPNLQ96NB1 174 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 ATG10Q9H0Y0 220 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 ZDHHC4Q9NPG8 344 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 SLC22A14Q9Y267 594 aa24.06■■□□□ 1.44
DNMT3A-206ENST00000406659 ARHGEF33A8MVX0 844 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 K7ESM1 405 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 IFRD1O00458 451 aaPredicted RBP24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 CASQ2O14958 399 aaPredicted RBP24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 SOD1P00441 154 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 GRIA2P42262 883 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 MAPK9P45984 424 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 PAGE3Q5JUK9 113 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 ATAT1Q5SQI0 421 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 CACHD1Q5VU97 1274 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 NEK5Q6P3R8 708 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 NUDT18Q6ZVK8 323 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 TRIM74Q86UV6 250 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 ATL1Q8WXF7 558 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 LRGUKQ96M69 825 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 ZBTB18Q99592 522 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 HDAC8Q9BY41 377 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 OR2AG1Q9H205 316 aa24.05■■□□□ 1.44
DNMT3A-206ENST00000406659 KRT87PA6NCN2 255 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 SLC6A2P23975 617 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 EIF2DP41214 584 aaKnown RBP24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 P2RY2P41231 377 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 DPTQ07507 201 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 SPATS1Q496A3 300 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 BCL7AQ4VC05 210 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 FAM46CQ5VWP2 391 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 EGFLAMQ63HQ2 1017 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 DHFR2Q86XF0 187 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 LILRA3Q8N6C8 439 aaPredicted RBP24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 L3MBTL4Q8NA19 623 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 SELENOMQ8WWX9 145 aa24.04■■□□□ 1.44
DNMT3A-206ENST00000406659 N4BP2L2Q92802 583 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms