RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 ZNF513Q8N8E2 541 aaPredicted RBP13.72□□□□□ -0.21
PRAME-205ENST00000405655 BHLHE22Q8NFJ8 381 aaPredicted RBP13.72□□□□□ -0.21
PRAME-205ENST00000405655 PROKR1Q8TCW9 393 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 STON2Q8WXE9 905 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 MED8Q96G25 268 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 TRMT61BQ9BVS5 477 aaKnown RBP13.72□□□□□ -0.21
PRAME-205ENST00000405655 MKRN2Q9H000 416 aaKnown RBP13.72□□□□□ -0.21
PRAME-205ENST00000405655 STX18Q9P2W9 335 aaKnown RBP13.72□□□□□ -0.21
PRAME-205ENST00000405655 SLC23A2Q9UGH3 650 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 PSMD13Q9UNM6 376 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 OR1A2Q9Y585 309 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 FADS3Q9Y5Q0 445 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 CFAP99D6REC4 459 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 MANBAO00462 879 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 SLC22A2O15244 555 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 CHEK2O96017 543 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 PFN3P60673 137 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 FGL2Q14314 439 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 SLC2A7Q6PXP3 512 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 TMEM184AQ6ZMB5 413 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 RGL4Q8IZJ4 473 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 PHC3Q8NDX5 983 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 DNAJB14Q8TBM8 379 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 ABHD8Q96I13 439 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 TMEM74Q96NL1 305 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 CCM2Q9BSQ5 444 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 NUSAP1Q9BXS6 441 aaKnown RBP13.72□□□□□ -0.21
PRAME-205ENST00000405655 ACTR8Q9H981 624 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 DYRK4Q9NR20 520 aa13.72□□□□□ -0.21
PRAME-205ENST00000405655 FXYD1O00168 92 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 SLCO2B1O94956 709 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 CBSLP0DN79 551 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 ADSLP30566 484 aaPredicted RBP13.71□□□□□ -0.21
PRAME-205ENST00000405655 CBSP35520 551 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 VASPP50552 380 aaPredicted RBP13.71□□□□□ -0.21
PRAME-205ENST00000405655 TFF2Q03403 129 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 EIF4HQ15056 248 aaKnown RBP13.71□□□□□ -0.21
PRAME-205ENST00000405655 ITPRIPL2Q3MIP1 535 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 ATP6AP1LQ52LC2 224 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 RABL3Q5HYI8 236 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 PLEKHS1Q5SXH7 462 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 C6orf163Q5TEZ5 329 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 AGBL4Q5VU57 503 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 BLOC1S3Q6QNY0 202 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 ASZ1Q8WWH4 475 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 OR4K3Q96R72 315 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 PKP4Q99569 1192 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 SLC32A1Q9H598 525 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 RDH14Q9HBH5 336 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 FZD3Q9NPG1 666 aa13.71□□□□□ -0.21
PRAME-205ENST00000405655 SLC5A10A0PJK1 596 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 NME4O00746 187 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 NPC1O15118 1278 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 SLC16A8O95907 504 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 PAK4O96013 591 aaPredicted RBP13.71□□□□□ -0.22
PRAME-205ENST00000405655 EGFP01133 1207 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 C1QCP02747 245 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 COL9A1P20849 921 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 CD72P21854 359 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 MAT2AP31153 395 aaKnown RBP13.71□□□□□ -0.22
PRAME-205ENST00000405655 GRIA2P42262 883 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 PRLHRP49683 370 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 STX5Q13190 355 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 NAE1Q13564 534 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 FLOT2Q14254 428 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 LDLRAP1Q5SW96 308 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 CES5AQ6NT32 575 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 SUSD1Q6UWL2 747 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 FAM124AQ86V42 546 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 HDDC3Q8N4P3 179 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 TMEM159Q96B96 161 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 SPDL1Q96EA4 605 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 IL17FQ96PD4 163 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 VPS35Q96QK1 796 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 CDCA3Q99618 268 aaPredicted RBP13.71□□□□□ -0.22
PRAME-205ENST00000405655 SLC25A23Q9BV35 468 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 ACPTQ9BZG2 426 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 EGFL7Q9UHF1 273 aa13.71□□□□□ -0.22
PRAME-205ENST00000405655 E7EQ34 232 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 ACOT8O14734 319 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 ATG13O75143 517 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 SLC22A3O75751 556 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 MATN4O95460 622 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 FUCA1P04066 466 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 APODP05090 189 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 HIST1H2AGP0C0S8 130 aaPredicted RBP13.7□□□□□ -0.22
PRAME-205ENST00000405655 HIST1H2ADP20671 130 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 ME2P23368 584 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 SLC6A12P48065 614 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 ERVK-8P63133 956 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 DDX39BQ13838 428 aaKnown RBP13.7□□□□□ -0.22
PRAME-205ENST00000405655 COL9A2Q14055 689 aaPredicted RBP13.7□□□□□ -0.22
PRAME-205ENST00000405655 ADGRE1Q14246 886 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 CST6Q15828 149 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 WSCD2Q2TBF2 565 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 ZNF658BQ4V348 819 aaPredicted RBP13.7□□□□□ -0.22
PRAME-205ENST00000405655 ICE2Q659A1 982 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 CYP20A1Q6UW02 462 aa13.7□□□□□ -0.22
PRAME-205ENST00000405655 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.7□□□□□ -0.224e-7■■■□□ 18
PRAME-205ENST00000405655 CXorf40AQ8TE69 158 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms