RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 ENPP3O14638 875 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 PDCD5O14737 125 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 C1RP00736 705 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 CSF2P04141 144 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 MRPS6P82932 125 aaKnown RBP15.84■□□□□ 0.13
ITSN1-209ENST00000399352 NOMO2Q5JPE7 1267 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 PRAMEF19Q5SWL8 479 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 SETD6Q8TBK2 473 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 MKLN1Q9UL63 735 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 LOC100509620A0A075B734 347 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 TMEM233B4DJY2 109 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 HTR1BP28222 390 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 CLCN4P51793 760 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 RHBDL3P58872 404 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 RPS3AP61247 264 aaKnown RBP15.84■□□□□ 0.13
ITSN1-209ENST00000399352 UGT8Q16880 541 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 CRB2Q5IJ48 1285 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 PACRGLQ8N7B6 248 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 GLB1L3Q8NCI6 653 aaPredicted RBP15.84■□□□□ 0.13
ITSN1-209ENST00000399352 DENND6BQ8NEG7 585 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 BEX2Q9BXY8 128 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 SLC25A51Q9H1U9 297 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 BEX1Q9HBH7 125 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 GBA2Q9HCG7 927 aaPredicted RBP15.84■□□□□ 0.13
ITSN1-209ENST00000399352 CXCL11O14625 94 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 TAF10Q12962 218 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 IQCHQ86VS3 1027 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 RANBP3LQ86VV4 465 aaPredicted RBP15.84■□□□□ 0.13
ITSN1-209ENST00000399352 PCDH19Q8TAB3 1148 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 YTHDF1Q9BYJ9 559 aaKnown RBP15.84■□□□□ 0.13
ITSN1-209ENST00000399352 FKBPLQ9UIM3 349 aa15.84■□□□□ 0.13
ITSN1-209ENST00000399352 NOCTQ9UK39 431 aaKnown RBP15.84■□□□□ 0.13
ITSN1-209ENST00000399352 CLDN11O75508 207 aa15.83■□□□□ 0.13
ITSN1-209ENST00000399352 CLIC3O95833 236 aa15.83■□□□□ 0.13
ITSN1-209ENST00000399352 OPN1SWP03999 348 aa15.83■□□□□ 0.13
ITSN1-209ENST00000399352 OR4Q2P0C623 313 aa15.83■□□□□ 0.13
ITSN1-209ENST00000399352 SLC9A3P48764 834 aa15.83■□□□□ 0.13
ITSN1-209ENST00000399352 XKP51811 444 aa15.83■□□□□ 0.13
ITSN1-209ENST00000399352 EIF5AP63241 154 aaKnown RBP15.83■□□□□ 0.13
ITSN1-209ENST00000399352 RHDQ02161 417 aa15.83■□□□□ 0.13
ITSN1-209ENST00000399352 MEP1AQ16819 746 aa15.83■□□□□ 0.13
ITSN1-209ENST00000399352 RBM20Q5T481 1227 aaKnown RBP15.83■□□□□ 0.13
ITSN1-209ENST00000399352 KLHL36Q8N4N3 616 aa15.83■□□□□ 0.13
ITSN1-209ENST00000399352 C9orf43Q8TAL5 461 aaPredicted RBP15.83■□□□□ 0.13
ITSN1-209ENST00000399352 CNDP2Q96KP4 475 aaKnown RBP15.83■□□□□ 0.13
ITSN1-209ENST00000399352 DUSP26Q9BV47 211 aa15.83■□□□□ 0.13
ITSN1-209ENST00000399352 DPAGT1Q9H3H5 408 aa15.83■□□□□ 0.13
ITSN1-209ENST00000399352 XKR8Q9H6D3 395 aa15.83■□□□□ 0.13
ITSN1-209ENST00000399352 POLE4Q9NR33 117 aa15.83■□□□□ 0.13
ITSN1-209ENST00000399352 TRBV23OR9-2A0A075B6M9 112 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 PPEF2O14830 753 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 RB1P06400 928 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 CD2P06729 351 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 FCER2P06734 321 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 ZNF182P17025 639 aaPredicted RBP15.83■□□□□ 0.12
ITSN1-209ENST00000399352 RBM34P42696 430 aaKnown RBP15.83■□□□□ 0.12
ITSN1-209ENST00000399352 EEFSECP57772 596 aaKnown RBP15.83■□□□□ 0.12
ITSN1-209ENST00000399352 BTBD16Q32M84 506 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 SERPINA9Q86WD7 417 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 TFAP2BQ92481 460 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 MTERF1Q99551 399 aaKnown RBP15.83■□□□□ 0.12
ITSN1-209ENST00000399352 LPIN3Q9BQK8 851 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 B3GNT4Q9C0J1 378 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 TCRBV7S3A2A0A539 114 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 SLC15A5A6NIM6 579 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 B4GALT4O60513 344 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 GATBO75879 557 aaKnown RBP15.83■□□□□ 0.12
ITSN1-209ENST00000399352 CDRT1O95170 752 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 RPS3P23396 243 aaKnown RBP eCLIP15.83■□□□□ 0.12
ITSN1-209ENST00000399352 OR3A3P47888 321 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 OR3A2P47893 321 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 ZNF404Q494X3 552 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 PLPPR4Q7Z2D5 763 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 SNX29P2Q8IUI4 249 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 HID1Q8IV36 788 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 PHTF2Q8N3S3 785 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 DCAKDQ8WVC6 231 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 COQ8BQ96D53 544 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 TMED9Q9BVK6 235 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 GMIPQ9P107 970 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 MEMO1Q9Y316 297 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 LOC100130705A0A1B0GUX0 176 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 PEPDP12955 493 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 ERVK-8P63133 956 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 FUT2Q10981 343 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 CYP1B1Q16678 543 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 CCDC28AQ8IWP9 274 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 BRD7Q9NPI1 651 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 OXSMQ9NWU1 459 aa15.83■□□□□ 0.12
ITSN1-209ENST00000399352 ILVBLA1L0T0 632 aa15.82■□□□□ 0.12
ITSN1-209ENST00000399352 SIX3O95343 332 aaPredicted RBP15.82■□□□□ 0.12
ITSN1-209ENST00000399352 CD52P31358 61 aa15.82■□□□□ 0.12
ITSN1-209ENST00000399352 DNAJA1P31689 397 aaKnown RBP15.82■□□□□ 0.12
ITSN1-209ENST00000399352 RPA4Q13156 261 aa15.82■□□□□ 0.12
ITSN1-209ENST00000399352 SCGB2B2Q4G0G5 96 aa15.82■□□□□ 0.12
ITSN1-209ENST00000399352 ZCCHC12Q6PEW1 402 aa15.82■□□□□ 0.12
ITSN1-209ENST00000399352 CFAP206Q8IYR0 622 aa15.82■□□□□ 0.12
ITSN1-209ENST00000399352 TMEM168Q9H0V1 697 aa15.82■□□□□ 0.12
ITSN1-209ENST00000399352 AKTIPQ9H8T0 292 aa15.82■□□□□ 0.12
ITSN1-209ENST00000399352 FETUBQ9UGM5 382 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms