RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 EMBQ6PCB8 327 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 ZNF574Q6ZN55 896 aaPredicted RBP17.16■□□□□ 0.34
CTNS-203ENST00000399306 USP53Q70EK8 1073 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 AMIGO1Q86WK6 493 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 CPNE9Q8IYJ1 553 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 MYO1HQ8N1T3 1032 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 RAB42Q8N4Z0 105 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 HMGCLL1Q8TB92 370 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 SKA2Q8WVK7 121 aaPredicted RBP17.16■□□□□ 0.34
CTNS-203ENST00000399306 NCSTNQ92542 709 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 FAM136AQ96C01 138 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 HGH1Q9BTY7 390 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 SCNM1Q9BWG6 230 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 NRSN2Q9GZP1 204 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 SRMSQ9H3Y6 488 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 PPCSQ9HAB8 311 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.16■□□□□ 0.34
CTNS-203ENST00000399306 ANGPTL2Q9UKU9 493 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 RAB21Q9UL25 225 aa17.16■□□□□ 0.34
CTNS-203ENST00000399306 ATXN7L1Q9ULK2 861 aaPredicted RBP17.16■□□□□ 0.34
CTNS-203ENST00000399306 MTO1Q9Y2Z2 717 aaKnown RBP17.16■□□□□ 0.34
CTNS-203ENST00000399306 IGHV5-10-1A0A0J9YXX1 117 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 MYO1CO00159 1063 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 RASGRF2O14827 1237 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 ZBTB14O43829 449 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 FKBP9O95302 570 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 WISP3O95389 354 aaPredicted RBP17.15■□□□□ 0.34
CTNS-203ENST00000399306 TSPAN12O95859 305 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 ITGA2BP08514 1039 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 STMN1P16949 149 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 PKLRP30613 574 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 ABCG1P45844 678 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 VSNL1P62760 191 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 PRKAA1Q13131 559 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 CAMK2BQ13554 666 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 GRB7Q14451 532 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 NKAIN2Q5VXU1 208 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 IGF2-ASQ6U949 168 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 TAOK1Q7L7X3 1001 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 TMPRSS9Q7Z410 1059 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 PRSS42Q7Z5A4 293 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 ARHGAP22Q7Z5H3 698 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 EEF1AKMT1Q8WVE0 214 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 RSC1A1Q92681 617 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 ATXN7L3BQ96GX2 97 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 CCDC77Q9BR77 488 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 MENTQ9BUN1 341 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 SYNDIG1Q9H7V2 258 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 HRASLS2Q9NWW9 162 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 AKAP7Q9P0M2 348 aaPredicted RBP17.15■□□□□ 0.34
CTNS-203ENST00000399306 NOVA2Q9UNW9 492 aaKnown RBP17.15■□□□□ 0.34
CTNS-203ENST00000399306 ICKQ9UPZ9 632 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 NFS1Q9Y697 457 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 IKBKGQ9Y6K9 419 aa17.15■□□□□ 0.34
CTNS-203ENST00000399306 CCDC187A0A096LP49 1063 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 CCDC189A1A4V9 331 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 ZNF839A8K0R7 811 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 CAPN5O15484 640 aaPredicted RBP17.14■□□□□ 0.33
CTNS-203ENST00000399306 PIAS1O75925 651 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 INHBAP08476 426 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 ENO2P09104 434 aaPredicted RBP17.14■□□□□ 0.33
CTNS-203ENST00000399306 ERGP11308 486 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 HOXB3P14651 431 aaPredicted RBP17.14■□□□□ 0.33
CTNS-203ENST00000399306 TYRP1P17643 537 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 CRABP2P29373 138 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 PRKG2Q13237 762 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 USP10Q14694 798 aaKnown RBP17.14■□□□□ 0.33
CTNS-203ENST00000399306 KIR2DS3Q14952 304 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 ERCC6LQ2NKX8 1250 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 ARMC6Q6NXE6 501 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 KMT5CQ86Y97 462 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 OR4E2Q8NGC2 313 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 OR9A1PQ8NGU1 263 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 OR2L8Q8NGY9 312 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 CFAP61Q8NHU2 1237 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 SLC22A18Q96BI1 424 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 DHRS4Q9BTZ2 278 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 SLC12A9Q9BXP2 914 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 B3GNT4Q9C0J1 378 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 RDH14Q9HBH5 336 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 GPAMQ9HCL2 828 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 LNPEPQ9UIQ6 1025 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 SLC39A10Q9ULF5 831 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 PCDHGA8Q9Y5G5 932 aa17.14■□□□□ 0.33
CTNS-203ENST00000399306 CEP295Q9C0D2 2601 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 MED19A0JLT2 244 aaPredicted RBP17.13■□□□□ 0.33
CTNS-203ENST00000399306 OR6C74A6NCV1 312 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 TLCD2A6NGC4 264 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 ARHGEF33A8MVX0 844 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 C2orf74A8MZ97 194 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 KRT38O76015 456 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 TPBGLP0DKB5 382 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 CYP2A7P20853 494 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 MAP4P27816 1152 aaKnown RBP17.13■□□□□ 0.33
CTNS-203ENST00000399306 MSH2P43246 934 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 CSRP3P50461 194 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 RAB10P61026 200 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 SLC29A2Q14542 456 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 RTP5Q14D33 572 aa17.13■□□□□ 0.33
CTNS-203ENST00000399306 EFTUD2Q15029 972 aaKnown RBP eCLIP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms