RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 SNX7Q9UNH6 387 aa15.08■□□□□ 0.01
LSS-202ENST00000397728 FAM159BA6NKW6 160 aa15.08■□□□□ 0
LSS-202ENST00000397728 KRT33AO76009 404 aa15.08■□□□□ 0
LSS-202ENST00000397728 KLF1Q13351 362 aaPredicted RBP15.08■□□□□ 0
LSS-202ENST00000397728 GK5Q6ZS86 529 aa15.08■□□□□ 0
LSS-202ENST00000397728 SLC32A1Q9H598 525 aa15.08■□□□□ 0
LSS-202ENST00000397728 DUSP12Q9UNI6 340 aa15.08■□□□□ 0
LSS-202ENST00000397728 GPR34Q9UPC5 381 aa15.08■□□□□ 0
LSS-202ENST00000397728 ERVK-11Q9UQG0 969 aa15.08■□□□□ 0
LSS-202ENST00000397728 LDB2O43679 373 aa15.08■□□□□ 0
LSS-202ENST00000397728 NRP2O60462 931 aa15.08■□□□□ 0
LSS-202ENST00000397728 TFPIP10646 304 aa15.08■□□□□ 0
LSS-202ENST00000397728 CLK1P49759 484 aaKnown RBP15.08■□□□□ 0
LSS-202ENST00000397728 SLC7A2P52569 658 aa15.08■□□□□ 0
LSS-202ENST00000397728 ANKRD46Q86W74 232 aa15.08■□□□□ 0
LSS-202ENST00000397728 ZDHHC13Q8IUH4 622 aa15.08■□□□□ 0
LSS-202ENST00000397728 MFSD6LQ8IWD5 586 aa15.08■□□□□ 0
LSS-202ENST00000397728 CPXM2Q8N436 756 aa15.08■□□□□ 0
LSS-202ENST00000397728 CPSF7Q8N684 471 aaKnown RBP15.08■□□□□ 0
LSS-202ENST00000397728 CAMKVQ8NCB2 501 aa15.08■□□□□ 0
LSS-202ENST00000397728 CENPIQ92674 756 aaPredicted RBP15.08■□□□□ 0
LSS-202ENST00000397728 CCL26Q9Y258 94 aa15.08■□□□□ 0
LSS-202ENST00000397728 RUVBL1Q9Y265 456 aaKnown RBP15.08■□□□□ 0
LSS-202ENST00000397728 DDX60LQ5H9U9 1706 aaKnown RBP15.08■□□□□ 0
LSS-202ENST00000397728 CAPN8A6NHC0 703 aa15.07■□□□□ 0
LSS-202ENST00000397728 AP2A2O94973 939 aa15.07■□□□□ 0
LSS-202ENST00000397728 CBSLP0DN79 551 aa15.07■□□□□ 0
LSS-202ENST00000397728 CBSP35520 551 aa15.07■□□□□ 0
LSS-202ENST00000397728 SEMA3AQ14563 771 aa15.07■□□□□ 0
LSS-202ENST00000397728 SLC44A4Q53GD3 710 aa15.07■□□□□ 0
LSS-202ENST00000397728 LUZP2Q86TE4 346 aa15.07■□□□□ 0
LSS-202ENST00000397728 BHLHE22Q8NFJ8 381 aaPredicted RBP15.07■□□□□ 0
LSS-202ENST00000397728 DNASE1L2Q92874 299 aa15.07■□□□□ 0
LSS-202ENST00000397728 NPAS2Q99743 824 aa15.07■□□□□ 0
LSS-202ENST00000397728 TMEM109Q9BVC6 243 aa15.07■□□□□ 0
LSS-202ENST00000397728 PRRG4Q9BZD6 226 aa15.07■□□□□ 0
LSS-202ENST00000397728 GALPQ9UBC7 116 aa15.07■□□□□ 0
LSS-202ENST00000397728 MAP4K5Q9Y4K4 846 aa15.07■□□□□ 0
LSS-202ENST00000397728 COPG1Q9Y678 874 aaKnown RBP15.07■□□□□ 0
LSS-202ENST00000397728 DGKBQ9Y6T7 804 aa15.07■□□□□ 0
LSS-202ENST00000397728 PRR5-ARHGAP8B1AHC4 643 aa15.07■□□□□ 0
LSS-202ENST00000397728 KERAO60938 352 aa15.07■□□□□ 0
LSS-202ENST00000397728 PDE9AO76083 593 aa15.07■□□□□ 0
LSS-202ENST00000397728 CCNYL3P0C7X3 344 aa15.07■□□□□ 0
LSS-202ENST00000397728 POLR2JP52435 117 aaKnown RBP15.07■□□□□ 0
LSS-202ENST00000397728 ARHGAP8P85298 464 aa15.07■□□□□ 0
LSS-202ENST00000397728 NFKB2Q00653 900 aa15.07■□□□□ 0
LSS-202ENST00000397728 MPP7Q5T2T1 576 aa15.07■□□□□ 0
LSS-202ENST00000397728 ZC3H14Q6PJT7 736 aaKnown RBP15.07■□□□□ 0
LSS-202ENST00000397728 LIX1Q8N485 282 aa15.07■□□□□ 0
LSS-202ENST00000397728 OR6Y1Q8NGX8 325 aa15.07■□□□□ 0
LSS-202ENST00000397728 KCNJ9Q92806 393 aa15.07■□□□□ 0
LSS-202ENST00000397728 SH3GL3Q99963 347 aa15.07■□□□□ 0
LSS-202ENST00000397728 IL21RQ9HBE5 538 aa15.07■□□□□ 0
LSS-202ENST00000397728 ARHGEF3Q9NR81 526 aa15.07■□□□□ 0
LSS-202ENST00000397728 GEMIN8Q9NWZ8 242 aaKnown RBP15.07■□□□□ 0
LSS-202ENST00000397728 TRIOBPQ9H2D6 2365 aa15.07■□□□□ 0
LSS-202ENST00000397728 PAICSP22234 425 aaKnown RBP15.07■□□□□ 0
LSS-202ENST00000397728 HSPA13P48723 471 aa15.07■□□□□ 0
LSS-202ENST00000397728 HNRNPKP61978 463 aaKnown RBP eCLIP15.07■□□□□ 04e-7■■■■□ 26.6
LSS-202ENST00000397728 ADAM17P78536 824 aa15.07■□□□□ 0
LSS-202ENST00000397728 RALGPS2Q86X27 583 aaPredicted RBP15.07■□□□□ 0
LSS-202ENST00000397728 ALKBH4Q9NXW9 302 aa15.07■□□□□ 0
LSS-202ENST00000397728 USE1Q9NZ43 259 aa15.07■□□□□ 0
LSS-202ENST00000397728 ABI3Q9P2A4 366 aa15.07■□□□□ 0
LSS-202ENST00000397728 A8MUA0 341 aa15.07■□□□□ 0
LSS-202ENST00000397728 CXCL10P02778 98 aa15.07■□□□□ 0
LSS-202ENST00000397728 PTPN5P54829 565 aa15.07■□□□□ 0
LSS-202ENST00000397728 HMGCS1Q01581 520 aa15.07■□□□□ 0
LSS-202ENST00000397728 OC90Q02509 493 aaPredicted RBP15.07■□□□□ 0
LSS-202ENST00000397728 RAB41Q5JT25 222 aa15.07■□□□□ 0
LSS-202ENST00000397728 USP53Q70EK8 1073 aa15.07■□□□□ 0
LSS-202ENST00000397728 THOC6Q86W42 341 aaKnown RBP15.07■□□□□ 0
LSS-202ENST00000397728 NPAS3Q8IXF0 933 aa15.07■□□□□ 0
LSS-202ENST00000397728 BANPQ8N9N5 519 aa15.07■□□□□ 0
LSS-202ENST00000397728 JSRP1Q96MG2 331 aaPredicted RBP15.07■□□□□ 0
LSS-202ENST00000397728 RIBC2Q9H4K1 309 aa15.07■□□□□ 0
LSS-202ENST00000397728 ADAP2Q9NPF8 381 aa15.07■□□□□ 0
LSS-202ENST00000397728 EGFL7Q9UHF1 273 aa15.07■□□□□ 0
LSS-202ENST00000397728 MYH10P35580 1976 aa15.07■□□□□ 0
LSS-202ENST00000397728 BCORQ6W2J9 1755 aa15.07■□□□□ 0
LSS-202ENST00000397728 MUSKO15146 869 aa15.06■□□□□ 0
LSS-202ENST00000397728 SMNDC1O75940 238 aaKnown RBP eCLIP15.06■□□□□ 06e-7■■■□□ 16.8
LSS-202ENST00000397728 SUOXP51687 545 aa15.06■□□□□ 0
LSS-202ENST00000397728 BLVRAP53004 296 aa15.06■□□□□ 0
LSS-202ENST00000397728 TAS2R50P59544 299 aa15.06■□□□□ 0
LSS-202ENST00000397728 RAB8AP61006 207 aa15.06■□□□□ 0
LSS-202ENST00000397728 CSTF1Q05048 431 aaKnown RBP15.06■□□□□ 0
LSS-202ENST00000397728 KIAA1161Q6NSJ0 714 aa15.06■□□□□ 0
LSS-202ENST00000397728 DEF8Q6ZN54 512 aa15.06■□□□□ 0
LSS-202ENST00000397728 OR9A1PQ8NGU1 263 aa15.06■□□□□ 0
LSS-202ENST00000397728 DTNBP1Q96EV8 351 aa15.06■□□□□ 0
LSS-202ENST00000397728 SCRN2Q96FV2 425 aa15.06■□□□□ 0
LSS-202ENST00000397728 CNOT6Q9ULM6 557 aaKnown RBP15.06■□□□□ 0
LSS-202ENST00000397728 TGDSO95455 350 aa15.06■□□□□ 0
LSS-202ENST00000397728 RYKP34925 604 aa15.06■□□□□ 0
LSS-202ENST00000397728 HERVK_113P63132 956 aa15.06■□□□□ 0
LSS-202ENST00000397728 SRSF11Q05519 484 aaKnown RBP15.06■□□□□ 0
LSS-202ENST00000397728 RFTN2Q52LD8 501 aaPredicted RBP15.06■□□□□ 0
LSS-202ENST00000397728 CAND1Q86VP6 1230 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms