RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 TSSK3Q96PN8 268 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 MVB12BQ9H7P6 319 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 CORO2BQ9UQ03 480 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 SLC22A14Q9Y267 594 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 PCDHB11Q9Y5F2 797 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 CPED1A4D0V7 1026 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 AGRPO00253 132 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 KLF11O14901 512 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 JUNDP17535 347 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 ME2P23368 584 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 PRRT3Q5FWE3 981 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 CPTPQ5TA50 214 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 MACC1Q6ZN28 852 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 RABEPKQ7Z6M1 372 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 THOC6Q86W42 341 aaKnown RBP8.09□□□□□ -1.11
PTPRD-204ENST00000397606 DSELQ8IZU8 1212 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 MAPK15Q8TD08 544 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 EME1Q96AY2 570 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 TOE1Q96GM8 510 aaKnown RBP8.09□□□□□ -1.11
PTPRD-204ENST00000397606 TXLNGYQ9BZA5 131 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 SLC29A3Q9BZD2 475 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 FZD3Q9NPG1 666 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 C1orf109Q9NX04 203 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 MKS1Q9NXB0 559 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 DMTF1Q9Y222 760 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 OR1A2Q9Y585 309 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 KRT75O95678 551 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 ANXA4P09525 319 aaPredicted RBP8.09□□□□□ -1.11
PTPRD-204ENST00000397606 SLC35E2BP0CK96 405 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 CD6P30203 668 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 RPA4Q13156 261 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 AMZ1Q400G9 498 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 C5orf22Q49AR2 442 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 IL23RQ5VWK5 629 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 ZNF765Q7L2R6 523 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 CYP2U1Q7Z449 544 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 TMEM145Q8NBT3 493 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 USP7Q93009 1102 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 ITCHQ96J02 903 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 OR52E6Q96RD3 313 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 HDAC8Q9BY41 377 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 ING2Q9H160 280 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 RUVBL1Q9Y265 456 aaKnown RBP8.09□□□□□ -1.11
PTPRD-204ENST00000397606 BBIP1A8MTZ0 92 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 AURKAO14965 403 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 PIP5K1BO14986 540 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 CD1DP15813 335 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 PPIBP23284 216 aaKnown RBP8.09□□□□□ -1.11
PTPRD-204ENST00000397606 PIK3R1P27986 724 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 ADSLP30566 484 aaPredicted RBP8.09□□□□□ -1.11
PTPRD-204ENST00000397606 MNX1P50219 401 aaPredicted RBP8.09□□□□□ -1.11
PTPRD-204ENST00000397606 MAPK12P53778 367 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 SLBPQ14493 270 aaKnown RBP eCLIP8.09□□□□□ -1.11
PTPRD-204ENST00000397606 ZNF648Q5T619 568 aaPredicted RBP8.09□□□□□ -1.11
PTPRD-204ENST00000397606 INTS11Q5TA45 600 aaKnown RBP8.09□□□□□ -1.11
PTPRD-204ENST00000397606 AFMIDQ63HM1 303 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 ACTRT2Q8TDY3 377 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 PANX1Q96RD7 426 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 CDRT15Q96T59 188 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 GALPQ9UBC7 116 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 TAC3Q9UHF0 121 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 V9GYQ6 96 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 F5P12259 2224 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 CXorf51AA0A1B0GTR3 108 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 A0A1W2PPC1 479 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 ZNF8P17098 575 aaPredicted RBP8.09□□□□□ -1.11
PTPRD-204ENST00000397606 P2RY2P41231 377 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 KIR3DL1P43629 444 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 DNAJB13P59910 316 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 NFKB2Q00653 900 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 GNA13Q14344 377 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 ALYREFQ86V81 257 aaKnown RBP8.09□□□□□ -1.11
PTPRD-204ENST00000397606 CYP4Z1Q86W10 505 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 PARGQ86W56 976 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 DCP2Q8IU60 420 aaKnown RBP8.09□□□□□ -1.11
PTPRD-204ENST00000397606 UBALD2Q8IYN6 164 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 CLEC4FQ8N1N0 589 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 SYNPOQ8N3V7 929 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 OR4E2Q8NGC2 313 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 FGF14Q92915 247 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 GDF15Q99988 308 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 APOOQ9BUR5 198 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 CD244Q9BZW8 370 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 CLEC4EQ9ULY5 219 aa8.09□□□□□ -1.11
PTPRD-204ENST00000397606 RLFQ13129 1914 aa8.09□□□□□ -1.12
PTPRD-204ENST00000397606 CLDN4O14493 209 aa8.08□□□□□ -1.12
PTPRD-204ENST00000397606 RFXANKO14593 260 aa8.08□□□□□ -1.12
PTPRD-204ENST00000397606 HTRA2O43464 458 aaPredicted RBP8.08□□□□□ -1.12
PTPRD-204ENST00000397606 ZMPSTE24O75844 475 aa8.08□□□□□ -1.12
PTPRD-204ENST00000397606 LRATO95237 230 aa8.08□□□□□ -1.12
PTPRD-204ENST00000397606 ZNF682O95780 498 aa8.08□□□□□ -1.12
PTPRD-204ENST00000397606 EBLN1P0CF75 366 aa8.08□□□□□ -1.12
PTPRD-204ENST00000397606 MYCLP1P12525 358 aaPredicted RBP8.08□□□□□ -1.12
PTPRD-204ENST00000397606 DUSP3P51452 185 aaPredicted RBP8.08□□□□□ -1.12
PTPRD-204ENST00000397606 HEPACAMQ14CZ8 416 aa8.08□□□□□ -1.12
PTPRD-204ENST00000397606 FRG2Q64ET8 278 aa8.08□□□□□ -1.12
PTPRD-204ENST00000397606 ZCCHC8Q6NZY4 707 aaKnown RBP8.08□□□□□ -1.12
PTPRD-204ENST00000397606 FOXR1Q6PIV2 292 aa8.08□□□□□ -1.12
PTPRD-204ENST00000397606 FAM129CQ86XR2 697 aa8.08□□□□□ -1.12
PTPRD-204ENST00000397606 KRT73Q86Y46 540 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms