RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ASF1AQ9Y294 204 aa26.79■■□□□ 1.88
CPNE1-203ENST00000397442 GDF5P43026 501 aa26.78■■□□□ 1.88
CPNE1-203ENST00000397442 HNMTP50135 292 aa26.78■■□□□ 1.88
CPNE1-203ENST00000397442 SPATS2Q86XZ4 545 aaKnown RBP26.78■■□□□ 1.88
CPNE1-203ENST00000397442 NRROSQ86YC3 692 aa26.78■■□□□ 1.88
CPNE1-203ENST00000397442 PHC3Q8NDX5 983 aa26.78■■□□□ 1.88
CPNE1-203ENST00000397442 OR5AR1Q8NGP9 310 aa26.78■■□□□ 1.88
CPNE1-203ENST00000397442 FBXL8Q96CD0 374 aa26.78■■□□□ 1.88
CPNE1-203ENST00000397442 CCDC138Q96M89 665 aa26.78■■□□□ 1.88
CPNE1-203ENST00000397442 INSM2Q96T92 566 aaPredicted RBP26.78■■□□□ 1.88
CPNE1-203ENST00000397442 PRDM8Q9NQV8 689 aa26.78■■□□□ 1.88
CPNE1-203ENST00000397442 CIDEBQ9UHD4 219 aa26.78■■□□□ 1.88
CPNE1-203ENST00000397442 ZDHHC2Q9UIJ5 367 aa26.78■■□□□ 1.88
CPNE1-203ENST00000397442 CFAP20Q9Y6A4 193 aaKnown RBP26.78■■□□□ 1.88
CPNE1-203ENST00000397442 MYO1CO00159 1063 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 GPR37L1O60883 481 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 SNUPNO95149 360 aaKnown RBP26.77■■□□□ 1.88
CPNE1-203ENST00000397442 TNFP01375 233 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 KITP10721 976 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 NAA20P61599 178 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 PRKAA1Q13131 559 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 CLCA4Q14CN2 919 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 TCEA2Q15560 299 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 UAP1L1Q3KQV9 507 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 ZNF542PQ5EBM4 170 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 LPCAT2Q7L5N7 544 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 PARGQ86W56 976 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 TCAIMQ8N3R3 496 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 RFWD2Q8NHY2 731 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 GAB3Q8WWW8 586 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 TRIM55Q9BYV6 548 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 SEMA4BQ9NPR2 832 aaPredicted RBP26.77■■□□□ 1.88
CPNE1-203ENST00000397442 KLHL14Q9P2G3 628 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 TBC1D29Q9UFV1 150 aa26.77■■□□□ 1.88
CPNE1-203ENST00000397442 EPB41L3Q9Y2J2 1087 aaPredicted RBP26.77■■□□□ 1.88
CPNE1-203ENST00000397442 TLR4O00206 839 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 IFRD1O00458 451 aaPredicted RBP26.76■■□□□ 1.87
CPNE1-203ENST00000397442 SLC6A12P48065 614 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 GRB7Q14451 532 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 GKAP1Q5VSY0 366 aaPredicted RBP26.76■■□□□ 1.87
CPNE1-203ENST00000397442 METTL2BQ6P1Q9 378 aaKnown RBP26.76■■□□□ 1.87
CPNE1-203ENST00000397442 BMP8AQ7Z5Y6 402 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 CUZD1Q86UP6 607 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 FBXL6Q8N531 539 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 TRPC4APQ8TEL6 797 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 KCNK13Q9HB14 408 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 STOX2Q9P2F5 926 aaPredicted RBP26.76■■□□□ 1.87
CPNE1-203ENST00000397442 FBXO4Q9UKT5 387 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 FANCMQ8IYD8 2048 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 KNL1Q8NG31 2342 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 A0A1B0GTL3 188 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 PABPN1LA6NDY0 278 aaKnown RBP26.76■■□□□ 1.87
CPNE1-203ENST00000397442 EML2O95834 649 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 SLC16A8O95907 504 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 TROVE2P10155 538 aaKnown RBP eCLIP26.76■■□□□ 1.87
CPNE1-203ENST00000397442 SH3BP2P78314 561 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 LCP2Q13094 533 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 WDR45BQ5MNZ6 344 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 RGL4Q8IZJ4 473 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 OR5K2Q8NHB8 316 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 AGR3Q8TD06 166 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 GPBAR1Q8TDU6 330 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 SEC16BQ96JE7 1060 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 EML4Q9HC35 981 aaKnown RBP26.76■■□□□ 1.87
CPNE1-203ENST00000397442 SCHIP1Q9P0W5 487 aaPredicted RBP26.76■■□□□ 1.87
CPNE1-203ENST00000397442 PCOLCE2Q9UKZ9 415 aa26.76■■□□□ 1.87
CPNE1-203ENST00000397442 STK16O75716 305 aa26.75■■□□□ 1.87
CPNE1-203ENST00000397442 IMPA1P29218 277 aa26.75■■□□□ 1.87
CPNE1-203ENST00000397442 RPL14P50914 215 aaKnown RBP26.75■■□□□ 1.87
CPNE1-203ENST00000397442 PMS2CLQ68D20 193 aa26.75■■□□□ 1.87
CPNE1-203ENST00000397442 DUS1LQ6P1R4 473 aaKnown RBP26.75■■□□□ 1.87
CPNE1-203ENST00000397442 WASH2PQ6VEQ5 465 aa26.75■■□□□ 1.87
CPNE1-203ENST00000397442 GOLGA7Q7Z5G4 137 aa26.75■■□□□ 1.87
CPNE1-203ENST00000397442 DCUN1D3Q8IWE4 304 aa26.75■■□□□ 1.87
CPNE1-203ENST00000397442 NELL1Q92832 810 aa26.75■■□□□ 1.87
CPNE1-203ENST00000397442 C12orf66Q96MD2 445 aa26.75■■□□□ 1.87
CPNE1-203ENST00000397442 HGH1Q9BTY7 390 aa26.75■■□□□ 1.87
CPNE1-203ENST00000397442 WASH6PQ9NQA3 447 aa26.75■■□□□ 1.87
CPNE1-203ENST00000397442 SPAG17Q6Q759 2223 aa26.75■■□□□ 1.87
CPNE1-203ENST00000397442 TNRC6BQ9UPQ9 1833 aaKnown RBP26.74■■□□□ 1.87
CPNE1-203ENST00000397442 A6NCN8 305 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 PDZK1P1A8MUH7 402 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 ZNF195O14628 629 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 CCNT2O60583 730 aaKnown RBP26.74■■□□□ 1.87
CPNE1-203ENST00000397442 ITPKAP23677 461 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 ACTR1BP42025 376 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 ACTR1AP61163 376 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 GTF2H2Q13888 395 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 PTCHD3Q3KNS1 767 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 GTF2H2CQ6P1K8 395 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 SLC30A9Q6PML9 568 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 ABRAXAS1Q6UWZ7 409 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 MAVSQ7Z434 540 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 PHACTR4Q8IZ21 702 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 OR9A1PQ8NGU1 263 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 C10orf82Q8WW14 230 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 ATG10Q9H0Y0 220 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 OPTCQ9UBM4 332 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 DCTN4Q9UJW0 460 aa26.74■■□□□ 1.87
CPNE1-203ENST00000397442 ZNF225Q9UK10 706 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms