RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 OR13J1Q8NGT2 312 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 OR4L1Q8NH43 312 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 CALML6Q8TD86 181 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 PEX13Q92968 403 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 AP2M1Q96CW1 435 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 CERS2Q96G23 380 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 RUFY1Q96T51 708 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 SPATA16Q9BXB7 569 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 FAM83DQ9H4H8 585 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 RMI1Q9H9A7 625 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 MLXIPLQ9NP71 852 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 TREX1Q9NSU2 369 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 IL1RAPL1Q9NZN1 696 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 TXNDC16Q9P2K2 825 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 PCDHGB7Q9Y5F8 929 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 IKBKGQ9Y6K9 419 aa13.35□□□□□ -0.27
SEC13-205ENST00000397101 CACNA1DQ01668 2161 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 ZCWPW2A0A1B0GU75 182 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 TCRBV9S1A1TA0A576 114 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 RGSL1A5PLK6 1076 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 WIPF3A6NGB9 483 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 OR51F1A6NGY5 319 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 C21orf140B9A014 251 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 POC1B-GALNT4F8VUJ3 575 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 PFDN6O15212 129 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 DNAJC6O75061 913 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 EML2O95834 649 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 ZNF28P17035 718 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 ITGALP20701 1170 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 CLCNKAP51800 687 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 KLHL38Q2WGJ6 581 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 HSP90AA5PQ58FG0 334 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 UBAP2Q5T6F2 1119 aaKnown RBP13.34□□□□□ -0.27
SEC13-205ENST00000397101 MRNIPQ6NTE8 343 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 NEPROQ6NW34 567 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 CYB5D1Q6P9G0 228 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 TRMT10BQ6PF06 316 aaKnown RBP13.34□□□□□ -0.27
SEC13-205ENST00000397101 DOK6Q6PKX4 331 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 RFLNAQ6ZTI6 216 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 HDXQ7Z353 690 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 SDCCAG8Q86SQ7 713 aaPredicted RBP13.34□□□□□ -0.27
SEC13-205ENST00000397101 PPM1NQ8N819 430 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 GPR26Q8NDV2 337 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 THAP4Q8WY91 577 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 EID2BQ96D98 161 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 CYTH2Q99418 400 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 TTC1Q99614 292 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 FAM167BQ9BTA0 163 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 ABCG8Q9H221 673 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 FAM96AQ9H5X1 160 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 ASB8Q9H765 288 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 CATSPERZQ9NTU4 200 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 ZFATQ9P243 1243 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 CRLS1Q9UJA2 301 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 TMEM98Q9Y2Y6 226 aa13.34□□□□□ -0.27
SEC13-205ENST00000397101 OAS3Q9Y6K5 1087 aaKnown RBP13.34□□□□□ -0.27
SEC13-205ENST00000397101 TEP1Q99973 2627 aaKnown RBP13.34□□□□□ -0.27
SEC13-205ENST00000397101 ESPL1Q14674 2120 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 TRBV23OR9-2A0A075B6M9 112 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 EXOC1LA0A1B0GW35 172 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 SMIM23A6NLE4 172 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 CD3EAPO15446 510 aaKnown RBP13.33□□□□□ -0.28
SEC13-205ENST00000397101 SRP72O76094 671 aaKnown RBP13.33□□□□□ -0.28
SEC13-205ENST00000397101 PRAMEF1O95521 474 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 ABHD2P08910 425 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 CCNYL3P0C7X3 344 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 RNF224P0DH78 156 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 FGF5P12034 268 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 F3P13726 295 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 NFATC2Q13469 925 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 ITGA9Q13797 1035 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 CHRNA6Q15825 494 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.33□□□□□ -0.28
SEC13-205ENST00000397101 MAMDC2Q7Z304 686 aaPredicted RBP13.33□□□□□ -0.28
SEC13-205ENST00000397101 HPS6Q86YV9 775 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 GALNT6Q8NCL4 622 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 GDAP1Q8TB36 358 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 ZNF398Q8TD17 642 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 SCAMP4Q969E2 229 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 PLEKHG4BQ96PX9 1271 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 RIOK2Q9BVS4 552 aaKnown RBP13.33□□□□□ -0.28
SEC13-205ENST00000397101 ZNF768Q9H5H4 540 aaKnown RBP13.33□□□□□ -0.28
SEC13-205ENST00000397101 CPNE7Q9UBL6 633 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 TBC1D29Q9UFV1 150 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 PADI1Q9ULC6 663 aa13.33□□□□□ -0.28
SEC13-205ENST00000397101 TLDC2A0PJX2 215 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 PIPSLA2A3N6 862 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 CDC14CA4D256 554 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 UGT1A9O60656 530 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 UGT1A6P19224 532 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 UGT1A1P22309 533 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 UGT1A4P22310 534 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 PPARGP37231 505 aaPredicted RBP13.32□□□□□ -0.28
SEC13-205ENST00000397101 MSH2P43246 934 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 UBE2IP63279 158 aaKnown RBP13.32□□□□□ -0.28
SEC13-205ENST00000397101 ACVR1Q04771 509 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 CACNG1Q06432 222 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 FOXM1Q08050 763 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 DNASE1L3Q13609 305 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 FRG1Q14331 258 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms