RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 NAT9Q9BTE0 207 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 HGH1Q9BTY7 390 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 SLC12A9Q9BXP2 914 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 GPR87Q9BY21 358 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 P2RY12Q9H244 342 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 ADNPQ9H2P0 1102 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 KCNF1Q9H3M0 494 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 INTS10Q9NVR2 710 aaKnown RBP13.52□□□□□ -0.25
SEC13-204ENST00000397099 SYBUQ9NX95 663 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 RNF14Q9UBS8 474 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 SERTAD3Q9UJW9 196 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 NEU2Q9Y3R4 380 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 PCDHGA6Q9Y5G7 932 aa13.52□□□□□ -0.25
SEC13-204ENST00000397099 HEMK1Q9Y5R4 338 aaPredicted RBP13.52□□□□□ -0.25
SEC13-204ENST00000397099 TLN1Q9Y490 2541 aaKnown RBP13.51□□□□□ -0.25
SEC13-204ENST00000397099 BTN3A1O00481 513 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 NDC80O14777 642 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 SLC28A2O43868 658 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 KLK3P07288 261 aaPredicted RBP13.51□□□□□ -0.25
SEC13-204ENST00000397099 HBQ1P09105 142 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 EBLN1P0CF75 366 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 CCNFP41002 786 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 VPS41P49754 854 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 RAB28P51157 221 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 PRKG2Q13237 762 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 SEMA3AQ14563 771 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 BRD3Q15059 726 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 TBR1Q16650 682 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 BORAQ6PGQ7 559 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 SPESP1Q6UW49 350 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 TMEM135Q86UB9 458 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 CAND1Q86VP6 1230 aaKnown RBP13.51□□□□□ -0.25
SEC13-204ENST00000397099 ADGRF3Q8IZF5 1079 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 EXD3Q8N9H8 876 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 OR5AR1Q8NGP9 310 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 COG1Q8WTW3 980 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 TCTN2Q96GX1 697 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 DPH2Q9BQC3 489 aaPredicted RBP13.51□□□□□ -0.25
SEC13-204ENST00000397099 TRMT1Q9NXH9 659 aaKnown RBP13.51□□□□□ -0.25
SEC13-204ENST00000397099 ACTR10Q9NZ32 417 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 KLHL42Q9P2K6 505 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 PCYOX1Q9UHG3 505 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 TUBD1Q9UJT1 453 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 TDRKHQ9Y2W6 561 aaKnown RBP13.51□□□□□ -0.25
SEC13-204ENST00000397099 COMMD10Q9Y6G5 202 aa13.51□□□□□ -0.25
SEC13-204ENST00000397099 HELZ2Q9BYK8 2649 aaKnown RBP13.51□□□□□ -0.25
SEC13-204ENST00000397099 LOC101059948A0A1B0GTJ6 334 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 TCRBV7S3A2A0A539 114 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 SLC9B1P1A6NJY1 282 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 BTN3A3O00478 584 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 SCRG1O75711 98 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 USP1O94782 785 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 TTC4O95801 387 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 TCN2P20062 427 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 MAGEA3P43357 314 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 ARCN1P48444 511 aaKnown RBP13.5□□□□□ -0.25
SEC13-204ENST00000397099 THOC5Q13769 683 aaKnown RBP13.5□□□□□ -0.25
SEC13-204ENST00000397099 DHX34Q14147 1143 aaKnown RBP13.5□□□□□ -0.25
SEC13-204ENST00000397099 SLC5A12Q1EHB4 618 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 PAPD7Q5XG87 772 aaKnown RBP13.5□□□□□ -0.25
SEC13-204ENST00000397099 NEPROQ6NW34 567 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 UNC5AQ6ZN44 842 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 CILP2Q8IUL8 1156 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 TMEM126BQ8IUX1 230 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 NAT8LQ8N9F0 302 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 GALNT6Q8NCL4 622 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 STARD8Q92502 1023 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 RAD51AP1Q96B01 352 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 ZNF501Q96CX3 271 aaPredicted RBP13.5□□□□□ -0.25
SEC13-204ENST00000397099 SERPINB12Q96P63 405 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 C17orf62Q9BQA9 187 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 TWSG1Q9GZX9 223 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 LHX9Q9NQ69 397 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 INTS7Q9NVH2 962 aaKnown RBP13.5□□□□□ -0.25
SEC13-204ENST00000397099 MARCH4Q9P2E8 410 aaPredicted RBP13.5□□□□□ -0.25
SEC13-204ENST00000397099 ICKQ9UPZ9 632 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 CDYLQ9Y232 598 aa13.5□□□□□ -0.25
SEC13-204ENST00000397099 ZNF462Q96JM2 2506 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 SPTA1P02549 2419 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 CTAGE9A4FU28 777 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 TMEM63AO94886 807 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 S1PR4O95977 384 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 CHRM5P08912 532 aaPredicted RBP13.49□□□□□ -0.25
SEC13-204ENST00000397099 CD63P08962 238 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 ARNTP27540 789 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 DLSTP36957 453 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 PAFAH1B1P43034 410 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 CCR10P46092 362 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 EIF3BP55884 814 aaKnown RBP13.49□□□□□ -0.25
SEC13-204ENST00000397099 GNG11P61952 73 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 RPS15P62841 145 aaKnown RBP13.49□□□□□ -0.25
SEC13-204ENST00000397099 CDC20Q12834 499 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 NAA25Q14CX7 972 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 KYNUQ16719 465 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 TTLL9Q3SXZ7 439 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 ANKRD20A4Q4UJ75 823 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 PWWP2BQ6NUJ5 590 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 GPR135Q8IZ08 494 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 DENND1AQ8TEH3 1009 aa13.49□□□□□ -0.25
SEC13-204ENST00000397099 LPGAT1Q92604 370 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms