RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ALPPP05187 535 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 MYCLP1P12525 358 aaPredicted RBP13.75□□□□□ -0.21
COL4A3-202ENST00000396578 HSDL1Q3SXM5 330 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 HMBOX1Q6NT76 420 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 PAOXQ6QHF9 649 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 PLPPR4Q7Z2D5 763 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 LRRC3Q9BY71 257 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 CYTH4Q9UIA0 394 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 KLRC4O43908 158 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 NETO2Q8NC67 525 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 NMUR1Q9HB89 426 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 SPIN1Q9Y657 262 aaPredicted RBP13.74□□□□□ -0.21
COL4A3-202ENST00000396578 FXYD6-FXYD2A0A087WZ82 144 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 AHCYP23526 432 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 DCKP27707 260 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 UBE2Q1Q7Z7E8 422 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 JSRP1Q96MG2 331 aaPredicted RBP13.74□□□□□ -0.21
COL4A3-202ENST00000396578 MYOCQ99972 504 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 CADM1Q9BY67 442 aaKnown RBP13.74□□□□□ -0.21
COL4A3-202ENST00000396578 FXYD6Q9H0Q3 95 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 GDAP2Q9NXN4 497 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 TCAF1Q9Y4C2 921 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 LPPQ93052 612 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 MIPEPQ99797 713 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 PLK2Q9NYY3 685 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 C14orf166Q9Y224 244 aaKnown RBP13.74□□□□□ -0.21
COL4A3-202ENST00000396578 H0YJX3 145 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 CDKN2BP42772 138 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 SLC15A1P46059 708 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 RFWD3Q6PCD5 774 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 ASB18Q6ZVZ8 466 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 PAQR7Q86WK9 346 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 ZNF366Q8N895 744 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 POLR3BQ9NW08 1133 aaPredicted RBP13.74□□□□□ -0.21
COL4A3-202ENST00000396578 DNAJB4Q9UDY4 337 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 DNM1LO00429 736 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 FFAR2O15552 330 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 CTNNB1P35222 781 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 MTPNP58546 118 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 GALNT13Q8IUC8 556 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 ZNF700Q9H0M5 742 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 CNTNAP1P78357 1384 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 HSD11B1P28845 292 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 PUS10Q3MIT2 529 aaKnown RBP13.74□□□□□ -0.21
COL4A3-202ENST00000396578 IQCHQ86VS3 1027 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 TDRPQ86YL5 185 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 PHC2Q8IXK0 858 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 DCBLD1Q8N8Z6 715 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 GALNT6Q8NCL4 622 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 OR5B17Q8NGF7 314 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 GPR152Q8TDT2 470 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 DCSTAMPQ9H295 470 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 CEP170BQ9Y4F5 1589 aaPredicted RBP13.74□□□□□ -0.21
COL4A3-202ENST00000396578 TCAF2A6NFQ2 919 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 CDH1P12830 882 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 S100A10P60903 97 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 ZBED5Q49AG3 693 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 NXPE1Q8N323 547 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 HCN3Q9P1Z3 774 aa13.74□□□□□ -0.21
COL4A3-202ENST00000396578 RBM47A0AV96 593 aaKnown RBP13.73□□□□□ -0.21
COL4A3-202ENST00000396578 FAM234BA2RU67 622 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 PRORSD1PA6NEY8 169 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 DNAJA1P31689 397 aaKnown RBP13.73□□□□□ -0.21
COL4A3-202ENST00000396578 AVPR1BP47901 424 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 CRYBB1P53674 252 aaPredicted RBP13.73□□□□□ -0.21
COL4A3-202ENST00000396578 CHAF1BQ13112 559 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 PRPF38BQ5VTL8 546 aaKnown RBP13.73□□□□□ -0.21
COL4A3-202ENST00000396578 LDB1Q86U70 411 aaPredicted RBP13.73□□□□□ -0.21
COL4A3-202ENST00000396578 XYLT1Q86Y38 959 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 MAB21L3Q8N8X9 362 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 FAM156AQ8NDB6 213 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 POLR2J3Q9H1A7 115 aaKnown RBP13.73□□□□□ -0.21
COL4A3-202ENST00000396578 RIC1Q4ADV7 1423 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 C9JVG2 144 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 GRK1Q15835 563 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 CRB2Q5IJ48 1285 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 SDHAF4Q5VUM1 108 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 FAM124AQ86V42 546 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 PLD5Q8N7P1 536 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 OR5J2Q8NH18 312 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 CAMK1GQ96NX5 476 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 KCNC2Q96PR1 638 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 P2RX7Q99572 595 aaKnown RBP13.73□□□□□ -0.21
COL4A3-202ENST00000396578 H7C2Y5 167 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 RASGRP1O95267 797 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 EPCAMP16422 314 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 HK1P19367 917 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 LCN1P31025 176 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 GNA12Q03113 381 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 CAPSQ13938 189 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 MINDY4Q4G0A6 757 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 ZNF227Q86WZ6 799 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 OXR1Q8N573 874 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 ATAD1Q8NBU5 361 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 SLC37A3Q8NCC5 494 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 SEC14L1Q92503 715 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 MSI1O43347 362 aaKnown RBP13.73□□□□□ -0.21
COL4A3-202ENST00000396578 NPTX1Q15818 432 aa13.73□□□□□ -0.21
COL4A3-202ENST00000396578 ZNF527Q8NB42 609 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms