RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 OR2T3Q8NH03 318 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 PIP4K2CQ8TBX8 421 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 ZUFSPQ96AP4 578 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 TMEM125Q96AQ2 219 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 COQ10AQ96MF6 247 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 BTBD9Q96Q07 612 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 ZBTB18Q99592 522 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 WRAP53Q9BUR4 548 aaKnown RBP14.61□□□□□ -0.07
CBX3-202ENST00000396386 ACTL8Q9H568 366 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 CERS4Q9HA82 394 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 LRTM1Q9HBL6 345 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 FARSBQ9NSD9 589 aaKnown RBP14.61□□□□□ -0.07
CBX3-202ENST00000396386 THG1LQ9NWX6 298 aaKnown RBP14.61□□□□□ -0.07
CBX3-202ENST00000396386 ASIC5Q9NY37 505 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 GMPR2Q9P2T1 348 aaKnown RBP14.61□□□□□ -0.07
CBX3-202ENST00000396386 AP4S1Q9Y587 144 aa14.61□□□□□ -0.07
CBX3-202ENST00000396386 EIF4E1BA6NMX2 242 aaKnown RBP14.6□□□□□ -0.07
CBX3-202ENST00000396386 ANKRD28O15084 1053 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 SPINT1O43278 529 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 TSPAN6O43657 245 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 HLA-EP13747 358 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 VARSP26640 1264 aaKnown RBP14.6□□□□□ -0.07
CBX3-202ENST00000396386 SLC7A1P30825 629 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 PTCHD3Q3KNS1 767 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 SGO1Q5FBB7 561 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 CACHD1Q5VU97 1274 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 IRAK1BP1Q5VVH5 260 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 CYP2U1Q7Z449 544 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 DPP10Q8N608 796 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 RASGEF1AQ8N9B8 481 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 ARRDC3Q96B67 414 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 TMEM159Q96B96 161 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 FBXL8Q96CD0 374 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 PPP1R16AQ96I34 528 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 MAGEB10Q96LZ2 347 aaPredicted RBP14.6□□□□□ -0.07
CBX3-202ENST00000396386 EFHD1Q9BUP0 239 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 LMAN2LQ9H0V9 348 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 DNAJC11Q9NVH1 559 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 FAM8A1Q9UBU6 413 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 SNX6Q9UNH7 406 aa14.6□□□□□ -0.07
CBX3-202ENST00000396386 YBX2Q9Y2T7 364 aaKnown RBP14.6□□□□□ -0.07
CBX3-202ENST00000396386 MAGEA13PA6NCF6 341 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 RNASEH2AO75792 299 aaKnown RBP14.59□□□□□ -0.07
CBX3-202ENST00000396386 UQCRBP14927 111 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 MAP4P27816 1152 aaKnown RBP14.59□□□□□ -0.07
CBX3-202ENST00000396386 GNPDA1P46926 289 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 METAP1P53582 386 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 CTSCP53634 463 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 EEFSECP57772 596 aaKnown RBP14.59□□□□□ -0.07
CBX3-202ENST00000396386 HMGCS1Q01581 520 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 C9orf64Q5T6V5 341 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 LCN8Q6JVE9 175 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 FBXL19Q6PCT2 694 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 PRR23BQ6ZRT6 265 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 RGL4Q8IZJ4 473 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 TMEM102Q8N9M5 508 aaPredicted RBP14.59□□□□□ -0.07
CBX3-202ENST00000396386 TERB1Q8NA31 727 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 P2RY13Q9BPV8 354 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 ZCCHC2Q9C0B9 1178 aaKnown RBP14.59□□□□□ -0.07
CBX3-202ENST00000396386 VCXQ9H320 206 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 TRPV4Q9HBA0 871 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 GDE1Q9NZC3 331 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 CNOT6Q9ULM6 557 aaKnown RBP14.59□□□□□ -0.07
CBX3-202ENST00000396386 KCNE1BA0A087WTH5 132 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 TMEM202A6NGA9 273 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 OTOL1A6NHN0 477 aaPredicted RBP14.59□□□□□ -0.07
CBX3-202ENST00000396386 AQP12BA6NM10 295 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 ZNF839A8K0R7 811 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 INPP4BO15327 924 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 PSIP1O75475 530 aaKnown RBP14.59□□□□□ -0.07
CBX3-202ENST00000396386 SMNDC1O75940 238 aaKnown RBP eCLIP14.59□□□□□ -0.07
CBX3-202ENST00000396386 GRIA3P42263 894 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 MAPK9P45984 424 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 KCNC3Q14003 757 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 ZNF234Q14588 700 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 INPP5AQ14642 412 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 CPSF6Q16630 551 aaKnown RBP eCLIP14.59□□□□□ -0.07
CBX3-202ENST00000396386 SLC2A7Q6PXP3 512 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 ZNF765Q7L2R6 523 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 AQP12AQ8IXF9 295 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 CPA6Q8N4T0 437 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 DNAJB14Q8TBM8 379 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 NUS1Q96E22 293 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 CCM2Q9BSQ5 444 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 ALG2Q9H553 416 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 ELOVL6Q9H5J4 265 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 HPS4Q9NQG7 708 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 C1orf109Q9NX04 203 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 ACTR3BQ9P1U1 418 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 SZT2Q5T011 3432 aa14.59□□□□□ -0.07
CBX3-202ENST00000396386 ARHGEF33A8MVX0 844 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 ARNTLO00327 626 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 ARPC2O15144 300 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 SEC22BO75396 215 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 PDYNP01213 254 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 CATP04040 527 aaKnown RBP14.58□□□□□ -0.08
CBX3-202ENST00000396386 ADRB3P13945 408 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 FCARP24071 287 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 GSK3BP49841 420 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 LIPEQ05469 1076 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms