RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TAS2R39P59534 338 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 C1QTNF8P60827 252 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 IFITM3Q01628 133 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 MERTKQ12866 999 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 TUBA3CQ13748 450 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ZNF235Q14590 738 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 INAVAQ3KP66 663 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 PITRM1Q5JRX3 1037 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 CTSL3PQ5NE16 218 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 SLX4IPQ5VYV7 408 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 CYHR1Q6ZMK1 362 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ZBTB49Q6ZSB9 765 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 TPRG1Q6ZUI0 275 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 KCTD8Q6ZWB6 473 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 TECPR1Q7Z6L1 1165 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ZSWIM9Q86XI8 627 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 DENND1CQ8IV53 801 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 KIAA2013Q8IYS2 634 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 FSTL5Q8N475 847 aaPredicted RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 RNF148Q8N7C7 305 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ZNF382Q96SR6 550 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 CSF3RQ99062 836 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 HDAC8Q9BY41 377 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ILKAPQ9H0C8 392 aaPredicted RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 POLR1BQ9H9Y6 1135 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 EFCAB1Q9HAE3 211 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 NT5MQ9NPB1 228 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 IARS2Q9NSE4 1012 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 PSME2Q9UL46 239 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 CNOT6Q9ULM6 557 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 OARD1Q9Y530 152 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 RAI2Q9Y5P3 530 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 ZNF839A8K0R7 811 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 TOR1BO14657 336 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 KCNJ13O60928 360 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 GMNNO75496 209 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 SEC24DO94855 1032 aaPredicted RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 PIGNO95427 931 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 IGSF6O95976 241 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 MYCP01106 439 aaPredicted RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 C8AP07357 584 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 ERGP11308 486 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 SRCP12931 536 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 ACRV1P26436 265 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 RGRP47804 291 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 HLCSP50747 726 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 ARSDP51689 593 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 SNRPD1P62314 119 aaKnown RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 DAB2P98082 770 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 CDC20Q12834 499 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 LMAN2Q12907 356 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 BOP1Q14137 746 aaKnown RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 SEMA3AQ14563 771 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 CBX2Q14781 532 aaPredicted RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 PCSK7Q16549 785 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 EML3Q32P44 896 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 PLEKHS1Q5SXH7 462 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 RNF219Q5W0B1 726 aaPredicted RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 GTF2IRD2BQ6EKJ0 949 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 NAPRTQ6XQN6 538 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 LARP4Q71RC2 724 aaKnown RBP eCLIP5.25□□□□□ -1.57
VPS41-203ENST00000395969 GTF2IRD2Q86UP8 949 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 EPHX4Q8IUS5 362 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 ADGRG2Q8IZP9 1017 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 DNAAF3Q8N9W5 541 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 ABHD11Q8NFV4 315 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 RAB2BQ8WUD1 216 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 CHAC2Q8WUX2 184 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 IRF7Q92985 503 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 TP53INP1Q96A56 240 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 RAB7BQ96AH8 199 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 EID2BQ96D98 161 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 TMA16Q96EY4 203 aaKnown RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 VMP1Q96GC9 406 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 SCARF2Q96GP6 870 aaPredicted RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 TXNDC15Q96J42 360 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 EGLN2Q96KS0 407 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 ADI1Q9BV57 179 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 GATA5Q9BWX5 397 aaPredicted RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 WDR12Q9GZL7 423 aaKnown RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 TMEM245Q9H330 911 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 ATP13A3Q9H7F0 1226 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 NOL11Q9H8H0 719 aaKnown RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 CD320Q9NPF0 282 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 MRPL40Q9NQ50 206 aaKnown RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 SPHK2Q9NRA0 654 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 COQ3Q9NZJ6 369 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 TXNDC16Q9P2K2 825 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 CD300AQ9UGN4 299 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 MTF2Q9Y483 593 aaPredicted RBP5.25□□□□□ -1.57
VPS41-203ENST00000395969 SNX13Q9Y5W8 968 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 LOC105371267A0A1B0GV96 52 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 ANHXE9PGG2 379 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 GFYI3L273 518 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 MLYCDO95822 493 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 CHEK2O96017 543 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 LRG1P02750 347 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 NUDT7P0C024 238 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 CKMT2P17540 419 aa5.25□□□□□ -1.57
VPS41-203ENST00000395969 IL1RNP18510 177 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms