RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 MT-ND5P03915 603 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 CSF2P04141 144 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 EDN1P05305 212 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 ATP5BP06576 529 aaKnown RBP5.38□□□□□ -1.55
AP3S1-202ENST00000395548 ANXA6P08133 673 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 STSP08842 583 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 XRCC6P12956 609 aaKnown RBP eCLIP5.38□□□□□ -1.55
AP3S1-202ENST00000395548 PORP16435 677 aaPredicted RBP5.38□□□□□ -1.55
AP3S1-202ENST00000395548 ZNF37AP17032 561 aaPredicted RBP5.38□□□□□ -1.55
AP3S1-202ENST00000395548 CCR9P51686 369 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 BPIFB3P59826 476 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 RPS16P62249 146 aaKnown RBP5.38□□□□□ -1.55
AP3S1-202ENST00000395548 PIGFQ07326 219 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 FOXM1Q08050 763 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 TAF10Q12962 218 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 CUL4BQ13620 913 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 SCARB2Q14108 478 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 CTTNQ14247 550 aaKnown RBP5.38□□□□□ -1.55
AP3S1-202ENST00000395548 CHRNA6Q15825 494 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 KHDC1Q4VXA5 237 aaKnown RBP5.38□□□□□ -1.55
AP3S1-202ENST00000395548 DCAF12Q5T6F0 453 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 ATP1A1-AS1Q5TC04 95 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 PLBD1Q6P4A8 553 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 VWA1Q6PCB0 445 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 PODNL1Q6PEZ8 512 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 XKRXQ6PP77 449 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 MOXD1Q6UVY6 613 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 SYNE3Q6ZMZ3 975 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 FAM47EQ6ZV65 393 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 TRIM69Q86WT6 500 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 CARNMT1Q8N4J0 409 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 TEX9Q8N6V9 391 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 TOR1AIP2Q8NFQ8 470 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 LMX1AQ8TE12 382 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 SORCS1Q8WY21 1168 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 THAP4Q8WY91 577 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 RAB24Q969Q5 203 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 TMEM125Q96AQ2 219 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 LRRC46Q96FV0 321 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 PIWIL1Q96J94 861 aaKnown RBP5.38□□□□□ -1.55
AP3S1-202ENST00000395548 CLPTM1LQ96KA5 538 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 MRGPRX4Q96LA9 322 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 JAKMIP1Q96N16 626 aaKnown RBP5.38□□□□□ -1.55
AP3S1-202ENST00000395548 TEFMQ96QE5 360 aaKnown RBP5.38□□□□□ -1.55
AP3S1-202ENST00000395548 SPAG5Q96R06 1193 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 NCAPGQ9BPX3 1015 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 TLR10Q9BXR5 811 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 CCSER1Q9C0I3 900 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 TMEM8AQ9HCN3 771 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 EIF2B3Q9NR50 452 aaKnown RBP5.38□□□□□ -1.55
AP3S1-202ENST00000395548 SPASTQ9UBP0 616 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 SERGEFQ9UGK8 458 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 RPS6KA6Q9UK32 745 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 PILRAQ9UKJ1 303 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 CDYLQ9Y232 598 aa5.38□□□□□ -1.55
AP3S1-202ENST00000395548 MYH10P35580 1976 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 A0A1W2PQM1 296 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 hCG_1807616A0A1W2PRN6 198 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 SERINC4A6NH21 518 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 MPPED1O15442 326 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 PROP1O75360 226 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 NDST3O95803 873 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 PENKP01210 267 aaPredicted RBP5.37□□□□□ -1.55
AP3S1-202ENST00000395548 CD1AP06126 327 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 CLTAP09496 248 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 SBK3P0C264 359 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 RXRAP19793 462 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 MAT2AP31153 395 aaKnown RBP5.37□□□□□ -1.55
AP3S1-202ENST00000395548 AKT2P31751 481 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 SLC8A1P32418 973 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 TAF6P49848 677 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 VAMP7P51809 220 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 DYRK1AQ13627 763 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 ZNF235Q14590 738 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 ASIC2Q16515 512 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 KYAT1Q16773 422 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 POM121L1PQ3SYA9 428 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 ZNF542PQ5EBM4 170 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 C9orf57Q5W0N0 161 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 KAZNQ674X7 775 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 RPUSD3Q6P087 351 aaKnown RBP5.37□□□□□ -1.55
AP3S1-202ENST00000395548 BHLHB9Q6PI77 547 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 CPLX2Q6PUV4 134 aaKnown RBP5.37□□□□□ -1.55
AP3S1-202ENST00000395548 R3HCC1LQ7Z5L2 792 aaKnown RBP5.37□□□□□ -1.55
AP3S1-202ENST00000395548 PARGQ86W56 976 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 ZNF366Q8N895 744 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 BRIX1Q8TDN6 353 aaKnown RBP5.37□□□□□ -1.55
AP3S1-202ENST00000395548 WFIKKN2Q8TEU8 576 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 SECISBP2Q96T21 854 aaKnown RBP5.37□□□□□ -1.55
AP3S1-202ENST00000395548 PRPF18Q99633 342 aaKnown RBP5.37□□□□□ -1.55
AP3S1-202ENST00000395548 DESI2Q9BSY9 194 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 MAGEB5Q9BZ81 275 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 PDCL3Q9H2J4 239 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 SYNCQ9H7C4 482 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 ZBTB40Q9NUA8 1239 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 ADAM21Q9UKJ8 722 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 GTF3C4Q9UKN8 822 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 TMEM5Q9Y2B1 443 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 ZNF510Q9Y2H8 683 aa5.37□□□□□ -1.55
AP3S1-202ENST00000395548 SNX8Q9Y5X2 465 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms