RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 GJD2Q9UKL4 321 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 LRG1P02750 347 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 ATXN1LP0C7T5 689 aaKnown RBP11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 PRKAR2AP13861 404 aaKnown RBP11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 PRKACGP22612 351 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 ITPKAP23677 461 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 PBLDP30039 288 aaPredicted RBP11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 PRDX3P30048 256 aaKnown RBP11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 GDF5P43026 501 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 KCNC1P48547 511 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 CLCN4P51793 760 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 TPGS1Q6ZTW0 290 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 TICAM1Q8IUC6 712 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 OR8H2Q8N162 312 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 GRIN3AQ8TCU5 1115 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 C2orf15Q8WU43 125 aaKnown RBP11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 ABHD8Q96I13 439 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 NUAK2Q9H093 628 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 MAGEE1Q9HCI5 957 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 GIN1Q9NXP7 522 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 PCDHGB5Q9Y5G0 923 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 CENPFP49454 3210 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 PIM1P11309 404 aaPredicted RBP11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 CD1EP15812 388 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 HTR6P50406 440 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 ADGRF1Q5T601 910 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 IRAK1BP1Q5VVH5 260 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 RRM2BQ7LG56 351 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 DTWD1Q8N5C7 304 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 NAT16Q8N8M0 369 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 TEX12Q9BXU0 123 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 EXD2Q9NVH0 621 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 TMEM45AQ9NWC5 275 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 ABCD2Q9UBJ2 740 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.44□□□□□ -0.584e-10■■■□□ 19.2
UBE2D3-209ENST00000394804 SPO11Q9Y5K1 396 aa11.44□□□□□ -0.58
UBE2D3-209ENST00000394804 A0A1B0GTW7 788 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 MTMR11A4FU01 709 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 FAM155AB1AL88 458 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 NBNO60934 754 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 IGFBP6P24592 240 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 ERVPABLB-1P60509 514 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 POLR2LP62875 67 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 ABHD18Q0P651 414 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 IL18R1Q13478 541 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 NPTX1Q15818 432 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 CLDN19Q8N6F1 224 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 ZBTB8BQ8NAP8 495 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 HPS1Q92902 700 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 DUS3LQ96G46 650 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 UHRF1Q96T88 793 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 PTPN18Q99952 460 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 SLC29A3Q9BZD2 475 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 REXO4Q9GZR2 422 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 ARMC7Q9H6L4 198 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 ZDHHC6Q9H6R6 413 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 MIEF1Q9NQG6 463 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 GKN1Q9NS71 199 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 MTRRQ9UBK8 725 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 OAS3Q9Y6K5 1087 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 PAPPA2Q9BXP8 1791 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 GRXCR2A6NFK2 248 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 LOC730098B7Z3J9 87 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 KRT75O95678 551 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 ALPIP09923 528 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 GGT1P19440 569 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 AQP1P29972 269 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 GPR17Q13304 367 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 STARD3Q14849 445 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 OR2T5Q6IEZ7 315 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 SPRED1Q7Z699 444 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 CHCHD4Q8N4Q1 142 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 OR2T29Q8NH02 315 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 TRUB1Q8WWH5 349 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 SLCO4A1Q96BD0 722 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 REPS1Q96D71 796 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 PYURFQ96I23 114 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 TNFRSF12AQ9NP84 129 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 PRDM5Q9NQX1 630 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 PCDHA9Q9Y5H5 950 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 MANBAO00462 879 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 TRBC1P01850 177 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 EBLN1P0CF75 366 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 COL6A1P12109 1028 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 NSG1P42857 185 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 ELP6Q0PNE2 266 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 DPY19L1Q2PZI1 675 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 MANEALQ5VSG8 457 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 RSBN1Q5VWQ0 802 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 NIPAL1Q6NVV3 410 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 BBS7Q8IWZ6 715 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 PIK3C3Q8NEB9 887 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 MS4A4AQ96JQ5 239 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 KATNBL1Q9H079 304 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 FAM118AQ9NWS6 357 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 KLHL3Q9UH77 587 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 VPS4AQ9UN37 437 aa11.43□□□□□ -0.58
UBE2D3-209ENST00000394804 DNAJB5O75953 348 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 OAZ2O95190 189 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 ATE1O95260 518 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms