RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 XYLBO75191 536 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 SEC22BO75396 215 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 DEAF1O75398 565 aaPredicted RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 H6PDO95479 791 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 TCF3P15923 654 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 GJA1P17302 382 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 POLR2EP19388 210 aaKnown RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 LHCGRP22888 699 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 XPAP23025 273 aaPredicted RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 PRPH2P23942 346 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 HOXA9P31269 272 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 GRIA2P42262 883 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 TUBA4AP68366 448 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 HTRA4P83105 476 aaPredicted RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 PLOD1Q02809 727 aaPredicted RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 PTSQ03393 145 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 DPY19L1Q2PZI1 675 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 ZNF284Q2VY69 593 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 KCTD21Q4G0X4 260 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 RFTN2Q52LD8 501 aaPredicted RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 GLYATQ6IB77 296 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 BORAQ6PGQ7 559 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 IYDQ6PHW0 289 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 DLEU7Q6UYE1 221 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 MSANTD1Q6ZTZ1 278 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 Q6ZVU0 165 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 SPRED1Q7Z699 444 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 SATL1Q86VE3 508 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 ALDH16A1Q8IZ83 802 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 ADGRG2Q8IZP9 1017 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 LIX1Q8N485 282 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 CBR4Q8N4T8 237 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 TRAM1L1Q8N609 369 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 KLHL23Q8NBE8 558 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 ITFG1Q8TB96 612 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 MCOLN3Q8TDD5 553 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 HCAR2Q8TDS4 363 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 DIS3LQ8TF46 1054 aaKnown RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 SKA2Q8WVK7 121 aaPredicted RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 ATL1Q8WXF7 558 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 IRF7Q92985 503 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 CLP1Q92989 425 aaKnown RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 SDCCAG3Q96C92 435 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 DGCR14Q96DF8 476 aaKnown RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 CCDC97Q96F63 343 aaPredicted RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 LRIG1Q96JA1 1093 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 TMEM74Q96NL1 305 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 HBEGFQ99075 208 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 TCF25Q9BQ70 676 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 HEPHQ9BQS7 1158 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 ZSCAN5AQ9BUG6 496 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 ADI1Q9BV57 179 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 UGT2B28Q9BY64 529 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 ACTL8Q9H568 366 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 CLMPQ9H6B4 373 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 IL23AQ9NPF7 189 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 SPHK2Q9NRA0 654 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 TDP1Q9NUW8 608 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 TUBA8Q9NY65 449 aaPredicted RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 PTTG2Q9NZH5 202 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 MARK1Q9P0L2 795 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 CCL27Q9Y4X3 112 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 INSL6Q9Y581 213 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 DOCK6Q96HP0 2047 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 SERTM1A2A2V5 107 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 UPK3BL1B0FP48 263 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 UPK3BL2E5RIL1 263 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 NPIPB8E9PQR5 432 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 SOCS2O14508 198 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 TPST1O60507 370 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 ERN1O75460 977 aaKnown RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 ASLP04424 464 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 PGRP06401 933 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 GSTM1P09488 218 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 HNRNPA1P09651 372 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 RAP2AP10114 183 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 MTHFD1P11586 935 aaKnown RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 TYRP14679 529 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 ATP6V1B1P15313 513 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 ZNF23P17027 643 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 CKMT2P17540 419 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 GGT1P19440 569 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 MYF6P23409 242 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 MAP4P27816 1152 aaKnown RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 OXTRP30559 389 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 CCR7P32248 378 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 CA5AP35218 305 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 GDF5P43026 501 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 SLC6A12P48065 614 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 HNRNPFP52597 415 aaKnown RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 RPS14P62263 151 aaKnown RBP7.03□□□□□ -1.28
SMAD1-202ENST00000394092 B4GALNT1Q00973 533 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 GSTM4Q03013 218 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 CHRNB3Q05901 458 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 CYP4F3Q08477 520 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 HSPA14Q0VDF9 509 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 MERTKQ12866 999 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 EPS8Q12929 822 aa7.03□□□□□ -1.28
SMAD1-202ENST00000394092 BOP1Q14137 746 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms