RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 TTI1O43156 1089 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 TTC4O95801 387 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 DLGAP3O95886 979 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 EBLN1P0CF75 366 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 TPBGLP0DKB5 382 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 PKMP14618 531 aaKnown RBP11.47□□□□□ -0.57
RFC4-202ENST00000392481 PGAM1P18669 254 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 CASQ1P31415 396 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 RHDQ02161 417 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 ABRQ12979 859 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 SRSF6Q13247 344 aaKnown RBP11.47□□□□□ -0.57
RFC4-202ENST00000392481 TUBB3Q13509 450 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 MAP7Q14244 749 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 KCNAB1Q14722 419 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 TMTC4Q5T4D3 741 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 UNC5AQ6ZN44 842 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 TIPARPQ7Z3E1 657 aaKnown RBP11.47□□□□□ -0.57
RFC4-202ENST00000392481 PPP1R3BQ86XI6 285 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 RASGRP3Q8IV61 690 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 DCUN1D3Q8IWE4 304 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 C17orf53Q8N3J3 647 aaPredicted RBP11.47□□□□□ -0.57
RFC4-202ENST00000392481 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.47□□□□□ -0.57
RFC4-202ENST00000392481 PPM1MQ96MI6 270 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 UBL7Q96S82 380 aaPredicted RBP11.47□□□□□ -0.57
RFC4-202ENST00000392481 EBNA1BP2Q99848 306 aaKnown RBP11.47□□□□□ -0.57
RFC4-202ENST00000392481 ULBP3Q9BZM4 244 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 TWSG1Q9GZX9 223 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 LATS2Q9NRM7 1088 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 FGF21Q9NSA1 209 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 C20orf96Q9NUD7 363 aaPredicted RBP11.47□□□□□ -0.57
RFC4-202ENST00000392481 ACTR10Q9NZ32 417 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 RARRES3Q9UL19 164 aa11.47□□□□□ -0.57
RFC4-202ENST00000392481 FASNP49327 2511 aaKnown RBP11.46□□□□□ -0.57
RFC4-202ENST00000392481 PIPSLA2A3N6 862 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 MAP3K7O43318 606 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 NIPSNAP2O75323 286 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 SPAG6O75602 509 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 CHRM5P08912 532 aaPredicted RBP11.46□□□□□ -0.57
RFC4-202ENST00000392481 CHRM3P20309 590 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 ATP5DP30049 168 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 RAB28P51157 221 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 TUBB4BP68371 445 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 DHX9Q08211 1270 aaKnown RBP11.46□□□□□ -0.57
RFC4-202ENST00000392481 ABHD18Q0P651 414 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 CTBP1Q13363 440 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 TUBB2AQ13885 445 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 GBX1Q14549 363 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 CRYMQ14894 314 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 KYNUQ16719 465 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 MSS51Q4VC12 460 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 ZNF789Q5FWF6 425 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 FBXO38Q6PIJ6 1188 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 SPESP1Q6UW49 350 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 DENND6AQ8IWF6 608 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 PDIK1LQ8N165 341 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 ESX1Q8N693 406 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 ZSCAN1Q8NBB4 408 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 OR8K5Q8NH50 307 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 CFAP61Q8NHU2 1237 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 SNF8Q96H20 258 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 ELMO2Q96JJ3 720 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 KRT12Q99456 494 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 TRIM51Q9BSJ1 452 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 FAM167BQ9BTA0 163 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 TUBB2BQ9BVA1 445 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 SYTL2Q9HCH5 934 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 SOHLH2Q9NX45 425 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 FBXO5Q9UKT4 447 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 PCDHGA4Q9Y5G9 962 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 MRFAP1Q9Y605 127 aa11.46□□□□□ -0.57
RFC4-202ENST00000392481 SMG1Q96Q15 3661 aaKnown RBP11.46□□□□□ -0.58
RFC4-202ENST00000392481 KIAA0754O94854 1291 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 SEC31AO94979 1220 aaKnown RBP11.45□□□□□ -0.58
RFC4-202ENST00000392481 MSL3P1P0C860 447 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 LIFP15018 202 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 ST6GAL1P15907 406 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 ZNF28P17035 718 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 WT1P19544 449 aaPredicted RBP11.45□□□□□ -0.58
RFC4-202ENST00000392481 PKLRP30613 574 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 SLC1A2P43004 574 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 KIR2DS3Q14952 304 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 BBS9Q3SYG4 887 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 SOWAHCQ53LP3 525 aaPredicted RBP11.45□□□□□ -0.58
RFC4-202ENST00000392481 HSP90AA5PQ58FG0 334 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 SPANXN3Q5MJ09 141 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 PWWP2BQ6NUJ5 590 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 HIBCHQ6NVY1 386 aaPredicted RBP11.45□□□□□ -0.58
RFC4-202ENST00000392481 TTC23LQ6PF05 361 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 C6orf15Q6UXA7 325 aaPredicted RBP11.45□□□□□ -0.58
RFC4-202ENST00000392481 ZBTB2Q8N680 514 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 LSM14AQ8ND56 463 aaKnown RBP11.45□□□□□ -0.58
RFC4-202ENST00000392481 SPATA4Q8NEY3 305 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 GABPB2Q8TAK5 448 aaPredicted RBP11.45□□□□□ -0.58
RFC4-202ENST00000392481 SKA2Q8WVK7 121 aaPredicted RBP11.45□□□□□ -0.58
RFC4-202ENST00000392481 KIAA1143Q96AT1 154 aaPredicted RBP11.45□□□□□ -0.58
RFC4-202ENST00000392481 LRRC39Q96DD0 335 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 FOPNLQ96NB1 174 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 TRAPPC9Q96Q05 1148 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 OR2A14Q96R47 310 aa11.45□□□□□ -0.58
RFC4-202ENST00000392481 MENTQ9BUN1 341 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms