RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 RAB42Q8N4Z0 105 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 MDM1Q8TC05 714 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 ZCCHC14Q8WYQ9 949 aaKnown RBP14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 UBXN4Q92575 508 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 RAD51AP1Q96B01 352 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 SLC30A3Q99726 388 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 CPNE1Q99829 537 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 RHOXF2Q9BQY4 288 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 RAB11FIP5Q9BXF6 653 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 RHOJQ9H4E5 214 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 ZNF768Q9H5H4 540 aaKnown RBP14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 THSD1Q9NS62 852 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 OR6C2Q9NZP2 312 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 PISDQ9UG56 409 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 TSR3Q9UJK0 312 aaKnown RBP14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 ICKQ9UPZ9 632 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 PSAT1Q9Y617 370 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 NFS1Q9Y697 457 aa14.6□□□□□ -0.07
IGHV3-53-201ENST00000390627 TLCD2A6NGC4 264 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 C2orf74A8MZ97 194 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 AGRPO00253 132 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 BTN3A1O00481 513 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 TNFSF15O95150 251 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 MATN4O95460 622 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 C1orf105O95561 183 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 CATP04040 527 aaKnown RBP14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 HGFP14210 728 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 POLR2CP19387 275 aaPredicted RBP14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 ECHS1P30084 290 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 PKLRP30613 574 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 BDKRB1P46663 353 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 RAB28P51157 221 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 CDKN2DP55273 166 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 ERVPABLB-1P60509 514 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 PDAP1Q13442 181 aaKnown RBP14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 NAB1Q13506 487 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 TBC1D25Q3MII6 688 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 FAM129CQ86XR2 697 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 CTAGE3PQ8IX95 158 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 CPNE9Q8IYJ1 553 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 FBF1Q8TES7 1133 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 PRR11Q96HE9 360 aaPredicted RBP14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 ELMO2Q96JJ3 720 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 ZNF578Q96N58 590 aaPredicted RBP14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 SLC46A1Q96NT5 459 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 CNTNAP3BQ96NU0 1288 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 CNTNAP3Q9BZ76 1288 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 XKR8Q9H6D3 395 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 SMYD2Q9NRG4 433 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 POMT2Q9UKY4 750 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 SLC39A10Q9ULF5 831 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 RUVBL2Q9Y230 463 aaKnown RBP14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 VWA7Q9Y334 891 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 KIF26BQ2KJY2 2108 aa14.59□□□□□ -0.07
IGHV3-53-201ENST00000390627 FAM95CA0A1B0GW59 222 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 PIPSLA2A3N6 862 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 EFCAB7A8K855 629 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 CXorf49A8MYA2 514 aaPredicted RBP14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 B4E171 279 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 BTN3A3O00478 584 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 PSIP1O75475 530 aaKnown RBP14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 ITIH1P19827 911 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 FDXRP22570 491 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 MCM3P25205 808 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 GP5P40197 560 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 TSPAN7P41732 249 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 PPP1CAP62136 330 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 KYNUQ16719 465 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 KBTBD12Q3ZCT8 623 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 TEX35Q5T0J7 233 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 TMEM164Q5U3C3 297 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 KMT5CQ86Y97 462 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 KDF1Q8NAX2 398 aaPredicted RBP14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 LRRN4CLQ8ND94 238 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 VPS39Q96JC1 886 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 MAP3K3Q99759 626 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 CDC42EP4Q9H3Q1 356 aaKnown RBP14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 ASCL3Q9NQ33 180 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 ACTR10Q9NZ32 417 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 SPATA7Q9P0W8 599 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 SEMA5BQ9P283 1151 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 PLAGL1Q9UM63 463 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 NFU1Q9UMS0 254 aa14.58□□□□□ -0.08
IGHV3-53-201ENST00000390627 PMS2P1A4D2B8 440 aa14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 CDRT15L2A8MXV6 281 aa14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 RASGRF2O14827 1237 aa14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 KIF1CO43896 1103 aaKnown RBP14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 C1QAP02745 245 aa14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 CHRM5P08912 532 aaPredicted RBP14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 CCL4P13236 92 aa14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 CDH3P22223 829 aa14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 MAP4P27816 1152 aaKnown RBP14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 ARL4DP49703 201 aa14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 SEPHS1P49903 392 aa14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 KPNA2P52292 529 aaKnown RBP14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 MAPK10P53779 464 aa14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 SLC12A2P55011 1212 aa14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 RAB15P59190 212 aa14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 TIAL1Q01085 375 aaKnown RBP eCLIP14.57□□□□□ -0.08
IGHV3-53-201ENST00000390627 SLMAPQ14BN4 828 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms