RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 PMF1-BGLAPU3KQ54 211 aa6.27□□□□□ -1.41
TRAV35-201ENST00000390462 RREB1Q92766 1687 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 SPATA31A1Q5TZJ5 1347 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 NUP188Q5SRE5 1749 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 NCF1BA6NI72 391 aaPredicted RBP6.26□□□□□ -1.41
TRAV35-201ENST00000390462 NCF1CA8MVU1 366 aaPredicted RBP6.26□□□□□ -1.41
TRAV35-201ENST00000390462 KIF2AO00139 706 aaPredicted RBP6.26□□□□□ -1.41
TRAV35-201ENST00000390462 MAGEB2O15479 319 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 AP5Z1O43299 807 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 KLK8O60259 260 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 CACNG3O60359 315 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 LIPFP07098 398 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 RNASE1P07998 156 aaKnown RBP6.26□□□□□ -1.41
TRAV35-201ENST00000390462 HSPA8P11142 646 aaKnown RBP6.26□□□□□ -1.41
TRAV35-201ENST00000390462 SRD5A1P18405 259 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 CDH3P22223 829 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 PTPN6P29350 595 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 ALDH4A1P30038 563 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 SSTR4P31391 388 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 GABRA5P31644 462 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 AKT2P31751 481 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 STIP1P31948 543 aaKnown RBP6.26□□□□□ -1.41
TRAV35-201ENST00000390462 SLC6A12P48065 614 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 CNN1P51911 297 aaKnown RBP6.26□□□□□ -1.41
TRAV35-201ENST00000390462 CXADRP78310 365 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 TNFRSF17Q02223 184 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 CFHR3Q02985 330 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 C1orf185Q5T7R7 199 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 ARHGEF16Q5VV41 709 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 B3GNTL1Q67FW5 361 aaPredicted RBP6.26□□□□□ -1.41
TRAV35-201ENST00000390462 CES5AQ6NT32 575 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 CYB5D1Q6P9G0 228 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 DLEU7Q6UYE1 221 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 RANBP10Q6VN20 620 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 LRRC70Q7Z2Q7 622 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 KLHDC8AQ8IYD2 350 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 TMEM132CQ8N3T6 1108 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 ANKRD13CQ8N6S4 541 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 OR52B4Q8NGK2 314 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 OR2T3Q8NH03 318 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 WDR20Q8TBZ3 569 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 HDAC7Q8WUI4 952 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 PIGKQ92643 395 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 FBXO32Q969P5 355 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 FKBP10Q96AY3 582 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 SLCO4A1Q96BD0 722 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 SPDL1Q96EA4 605 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 LINGO1Q96FE5 620 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 C16orf58Q96GQ5 468 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 KAZALD1Q96I82 304 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 PSKH2Q96QS6 385 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 PCDHB18PQ96TA0 734 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 TSPYL1Q9H0U9 437 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 NAPBQ9H115 298 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 STMN4Q9H169 189 aaPredicted RBP6.26□□□□□ -1.41
TRAV35-201ENST00000390462 CPNE5Q9HCH3 593 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 MSL2Q9HCI7 577 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 FAM114A2Q9NRY5 505 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 TFCP2L1Q9NZI6 479 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 DBNLQ9UJU6 430 aaKnown RBP6.26□□□□□ -1.41
TRAV35-201ENST00000390462 ERVK-11Q9UQG0 969 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 DLGAP4Q9Y2H0 992 aa6.26□□□□□ -1.41
TRAV35-201ENST00000390462 MRPL11Q9Y3B7 192 aaKnown RBP6.26□□□□□ -1.41
TRAV35-201ENST00000390462 HEMK1Q9Y5R4 338 aaPredicted RBP6.26□□□□□ -1.41
TRAV35-201ENST00000390462 NWD2Q9ULI1 1742 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 UTRNP46939 3433 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 KANSL1LA0AUZ9 987 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 TMEM8BA6NDV4 472 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 FAM90A10PA6NDY2 464 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 MFSD2BA6NFX1 497 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 DIRC3C9JPN6 131 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 MAP2K7O14733 419 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 CHADO15335 359 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 CYP27B1O15528 508 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 TLX2O43763 284 aaPredicted RBP6.25□□□□□ -1.41
TRAV35-201ENST00000390462 CH25HO95992 272 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 POLR2MP0CAP2 368 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 CALCBP10092 127 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 CD9P21926 228 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 CALB2P22676 271 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 NMBRP28336 390 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 APOBEC3AP31941 199 aaPredicted RBP6.25□□□□□ -1.41
TRAV35-201ENST00000390462 NPBWR1P48145 328 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 RGS7P49802 495 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 CLCN5P51795 746 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 INHBEP58166 350 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 ARHGAP1Q07960 439 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 MESP2Q0VG99 397 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 LARS2Q15031 903 aaKnown RBP6.25□□□□□ -1.41
TRAV35-201ENST00000390462 R3HDM1Q15032 1099 aaKnown RBP6.25□□□□□ -1.41
TRAV35-201ENST00000390462 DPYSL2Q16555 572 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 HADHQ16836 314 aaKnown RBP6.25□□□□□ -1.41
TRAV35-201ENST00000390462 CCDC57Q2TAC2 916 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 USH1GQ495M9 461 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 SLC36A3Q495N2 470 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 PDCD4Q53EL6 469 aaKnown RBP6.25□□□□□ -1.41
TRAV35-201ENST00000390462 TDRD12Q587J7 1177 aaKnown RBP6.25□□□□□ -1.41
TRAV35-201ENST00000390462 LDLRAP1Q5SW96 308 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 CCNYL2Q5T2Q4 361 aa6.25□□□□□ -1.41
TRAV35-201ENST00000390462 GCNT6Q5T4J0 391 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms