RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 FKBPLQ9UIM3 349 aa14□□□□□ -0.17
RTF1-201ENST00000389629 MAPRE3Q9UPY8 281 aa14□□□□□ -0.17
RTF1-201ENST00000389629 IQCF5A8MTL0 148 aa14□□□□□ -0.17
RTF1-201ENST00000389629 FYNP06241 537 aa14□□□□□ -0.17
RTF1-201ENST00000389629 VARSP26640 1264 aaKnown RBP14□□□□□ -0.17
RTF1-201ENST00000389629 APOFQ13790 326 aa14□□□□□ -0.17
RTF1-201ENST00000389629 LYSMD3Q7Z3D4 306 aa14□□□□□ -0.17
RTF1-201ENST00000389629 RASSF5Q8WWW0 418 aa14□□□□□ -0.17
RTF1-201ENST00000389629 OSBPL2Q9H1P3 480 aa14□□□□□ -0.17
RTF1-201ENST00000389629 DSN1Q9H410 356 aa14□□□□□ -0.17
RTF1-201ENST00000389629 C1orf109Q9NX04 203 aa14□□□□□ -0.17
RTF1-201ENST00000389629 COMMD3Q9UBI1 195 aa14□□□□□ -0.17
RTF1-201ENST00000389629 LSM7Q9UK45 103 aaKnown RBP14□□□□□ -0.17
RTF1-201ENST00000389629 HSPB11Q9Y547 144 aa14□□□□□ -0.17
RTF1-201ENST00000389629 SLC1A7O00341 560 aa14□□□□□ -0.17
RTF1-201ENST00000389629 PRRG1O14668 218 aa14□□□□□ -0.17
RTF1-201ENST00000389629 PRMT5O14744 637 aaPredicted RBP14□□□□□ -0.17
RTF1-201ENST00000389629 KPNA6O60684 536 aa14□□□□□ -0.17
RTF1-201ENST00000389629 KERAO60938 352 aa14□□□□□ -0.17
RTF1-201ENST00000389629 SERPINB7O75635 380 aa14□□□□□ -0.17
RTF1-201ENST00000389629 CNTN5O94779 1100 aa14□□□□□ -0.17
RTF1-201ENST00000389629 PGRP06401 933 aa14□□□□□ -0.17
RTF1-201ENST00000389629 SMPD1P17405 629 aa14□□□□□ -0.17
RTF1-201ENST00000389629 SLC6A2P23975 617 aa14□□□□□ -0.17
RTF1-201ENST00000389629 LRP8Q14114 963 aa14□□□□□ -0.17
RTF1-201ENST00000389629 C5orf22Q49AR2 442 aa14□□□□□ -0.17
RTF1-201ENST00000389629 OR7D4Q8NG98 312 aa14□□□□□ -0.17
RTF1-201ENST00000389629 TMEM203Q969S6 136 aa14□□□□□ -0.17
RTF1-201ENST00000389629 Q96MT0 163 aa14□□□□□ -0.17
RTF1-201ENST00000389629 TXNRD2Q9NNW7 524 aa14□□□□□ -0.17
RTF1-201ENST00000389629 AASSQ9UDR5 926 aa14□□□□□ -0.17
RTF1-201ENST00000389629 NR2F6P10588 404 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 KCNA5P22460 613 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 ALDH3B2P48448 385 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 ALDH7A1P49419 539 aaKnown RBP13.99□□□□□ -0.17
RTF1-201ENST00000389629 AGTR2P50052 363 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 MRPS6P82932 125 aaKnown RBP13.99□□□□□ -0.17
RTF1-201ENST00000389629 ERAP2Q6P179 960 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 CXCL17Q6UXB2 119 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 DSG4Q86SJ6 1040 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 DENND1CQ8IV53 801 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 RAVER1Q8IY67 606 aaKnown RBP13.99□□□□□ -0.17
RTF1-201ENST00000389629 MINDY1Q8N5J2 469 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 EBPLQ9BY08 206 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 CRTAC1Q9NQ79 661 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 ERVK13-1Q9NX77 482 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 LYVE1Q9Y5Y7 322 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 TCRBV3S1A0A5B6 114 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 TMX2-CTNND1H3BSU7 103 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 PBX3P40426 434 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 PPP5CP53041 499 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 SH3BP2P78314 561 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 OR2T5Q6IEZ7 315 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 LCN8Q6JVE9 175 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 RNF111Q6ZNA4 994 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 OR6K2Q8NGY2 324 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 OR2T29Q8NH02 315 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 ANKRD49Q8WVL7 239 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 IPCEF1Q8WWN9 437 aaPredicted RBP13.99□□□□□ -0.17
RTF1-201ENST00000389629 FCGR1BQ92637 280 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 ZNF486Q96H40 463 aaPredicted RBP13.99□□□□□ -0.17
RTF1-201ENST00000389629 BTN2A3PQ96KV6 586 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 TCF25Q9BQ70 676 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 MMP27Q9H306 513 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 PTGFRNQ9P2B2 879 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 CFL2Q9Y281 166 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 I3L521 148 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 TNNI3P19429 210 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 TUBA1BP68363 451 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 FPGSQ05932 587 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 SLC36A3Q495N2 470 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 TUBA1AQ71U36 451 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 ALDH16A1Q8IZ83 802 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 OR13J1Q8NGT2 312 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 BTN2A2Q8WVV5 523 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 LRCH3Q96II8 777 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 ZNF641Q96N77 438 aaPredicted RBP13.99□□□□□ -0.17
RTF1-201ENST00000389629 TRPM5Q9NZQ8 1165 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 TMEM181Q9P2C4 612 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 A6NL46 340 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 DFNA5O60443 496 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 CREG1O75629 220 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 ITGB1P05556 798 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 CD247P20963 164 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 ITPKAP23677 461 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 CD52P31358 61 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 NNMTP40261 264 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 CDKN2DP55273 166 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 TIGD5Q53EQ6 642 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 SPANXN4Q5MJ08 99 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 LCN1P1Q5VSP4 162 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 GPRIN1Q7Z2K8 1008 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 ITIH5Q86UX2 942 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 ADGRG5Q8IZF4 528 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 SPARTQ8N0X7 666 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 TMEM199Q8N511 208 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 FRS2Q8WU20 508 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 AP3S1Q92572 193 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 SIPA1Q96FS4 1042 aa13.99□□□□□ -0.17
RTF1-201ENST00000389629 ZNF717Q9BY31 904 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms