RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 CPSF7Q8N684 471 aaKnown RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 KLHDC1Q8N7A1 406 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 NFAM1Q8NET5 270 aaPredicted RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 MYRIPQ8NFW9 859 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 SVIPQ8NHG7 77 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 MRAPQ8TCY5 172 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 RNF128Q8TEB7 428 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 AGAP11Q8TF27 550 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 SSC4DQ8WTU2 575 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 PHLDA1Q8WV24 401 aaPredicted RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 CCT6BQ92526 530 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 SMARCE1Q969G3 411 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ZKSCAN4Q969J2 545 aaPredicted RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 NUS1Q96E22 293 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 SAAL1Q96ER3 474 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 MMABQ96EY8 250 aaPredicted RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 CALML4Q96GE6 196 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 FAM81BQ96LP2 452 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 C10orf90Q96M02 699 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 NUDCD1Q96RS6 583 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 FNBP1Q96RU3 617 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 LGMNQ99538 433 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 NKX3-1Q99801 234 aaPredicted RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 CTRCQ99895 268 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 FUZQ9BT04 418 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 URM1Q9BTM9 101 aaKnown RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ABHD6Q9BV23 337 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 NUP85Q9BW27 656 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 GPR63Q9BZJ6 419 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 FAM49AQ9H0Q0 323 aaPredicted RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 PARLQ9H300 379 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ASB8Q9H765 288 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 BRF2Q9HAW0 419 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 RIC8AQ9NPQ8 531 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 GEMIN8Q9NWZ8 242 aaKnown RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 PPP1R14DQ9NXH3 145 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 GTSE1Q9NYZ3 720 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 CWC15Q9P013 229 aaKnown RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ADAM22Q9P0K1 906 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 IL17CQ9P0M4 197 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ABI3Q9P2A4 366 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 THAP10Q9P2Z0 257 aaPredicted RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 CACNG4Q9UBN1 327 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 OSGIN1Q9UJX0 560 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 FBXW11Q9UKB1 542 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 SARDHQ9UL12 918 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 PNMA2Q9UL42 364 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 PA2G4Q9UQ80 394 aaKnown RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 NAALAD2Q9Y3Q0 740 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 TMEM184BQ9Y519 407 aaPredicted RBP0.39□□□□□ -2.35
SNORD28-201ENST00000384706 CAPN7Q9Y6W3 813 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ARID1AO14497 2285 aa0.39□□□□□ -2.35
SNORD28-201ENST00000384706 ARHGEF40Q8TER5 1519 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 IGLV4-3A0A075B6K6 122 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 IGHV4-30-2A0A087WSY4 118 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 A0A1W2PQM1 296 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 TMEM8BA6NDV4 472 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 PLEKHD1A6NEE1 506 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 SHISA7A6NL88 538 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 GAPDHSO14556 408 aaPredicted RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 MAP2K7O14733 419 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 SMAD9O15198 467 aaKnown RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 OGTO15294 1046 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 PRC1O43663 620 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 SNAP91O60641 907 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 GLRA3O75311 464 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 SH3BGRLO75368 114 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 GPC4O75487 556 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 CDK2AP2O75956 126 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 TRUB2O95900 331 aaKnown RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 HIST1H2ABP04908 130 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 IGHV4-31P0DP07 118 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 PRKAR1AP10644 381 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 HSD3B1P14060 373 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 DARSP14868 501 aaKnown RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 ZNF17P17021 662 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 RPL35AP18077 110 aaKnown RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 HIST1H2ADP20671 130 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 NMBRP28336 390 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 HLA-FP30511 346 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 HTR3AP46098 478 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 KHKP50053 298 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 PDX1P52945 283 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 RARSP54136 660 aaKnown RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 EIF3BP55884 814 aaKnown RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 RIPK4P57078 832 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 KRTAP10-10P60014 251 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 SNRPEP62304 92 aaKnown RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 CX3CL1P78423 397 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 IGLV3-21P80748 117 aaPredicted RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 ZBED6P86452 979 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 TFAP4Q01664 338 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 GCNT1Q02742 428 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 GUCY2DQ02846 1103 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 CEBPZQ03701 1054 aaKnown RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 GALNT2Q10471 571 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 GAGE2BQ13066 116 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 OS9Q13438 667 aaPredicted RBP0.38□□□□□ -2.35
SNORD28-201ENST00000384706 ITGA7Q13683 1181 aa0.38□□□□□ -2.35
SNORD28-201ENST00000384706 UBE4AQ14139 1066 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms