RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 K7EPI3 171 aa26.13■■□□□ 1.77
MSX1-201ENST00000382723 IFRD1O00458 451 aaPredicted RBP26.13■■□□□ 1.77
MSX1-201ENST00000382723 THEGLP0DJG4 465 aa26.13■■□□□ 1.77
MSX1-201ENST00000382723 SRP54P61011 504 aaKnown RBP26.13■■□□□ 1.77
MSX1-201ENST00000382723 DCBLD1Q8N8Z6 715 aa26.13■■□□□ 1.77
MSX1-201ENST00000382723 CADM4Q8NFZ8 388 aa26.13■■□□□ 1.77
MSX1-201ENST00000382723 OR52B6Q8NGF0 335 aa26.13■■□□□ 1.77
MSX1-201ENST00000382723 FBXL8Q96CD0 374 aa26.13■■□□□ 1.77
MSX1-201ENST00000382723 KCNA7Q96RP8 456 aa26.13■■□□□ 1.77
MSX1-201ENST00000382723 ABCF3Q9NUQ8 709 aa26.13■■□□□ 1.77
MSX1-201ENST00000382723 DNAJC28Q9NX36 388 aa26.13■■□□□ 1.77
MSX1-201ENST00000382723 VTI1BQ9UEU0 232 aa26.13■■□□□ 1.77
MSX1-201ENST00000382723 WDR37Q9Y2I8 494 aa26.13■■□□□ 1.77
MSX1-201ENST00000382723 ST14Q9Y5Y6 855 aa26.13■■□□□ 1.77
MSX1-201ENST00000382723 SLCO1B7G3V0H7 640 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 TOR1BO14657 336 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 SKAP2O75563 359 aaPredicted RBP26.12■■□□□ 1.77
MSX1-201ENST00000382723 JUNP05412 331 aaKnown RBP26.12■■□□□ 1.77
MSX1-201ENST00000382723 MAOBP27338 520 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 GGT5P36269 586 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 MAGEA9P43362 315 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 HK2P52789 917 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 ALG11Q2TAA5 492 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 SYVN1Q86TM6 617 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 HID1Q8IV36 788 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 AFAP1L2Q8N4X5 818 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 OR5AR1Q8NGP9 310 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 ATP6V1E2Q96A05 226 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 CDK15Q96Q40 435 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 IPPKQ9H8X2 491 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 TNFRSF10CO14798 259 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 RASGRP1O95267 797 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 BCKDHBP21953 392 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 PTCHD3Q3KNS1 767 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 SLC9B1Q4ZJI4 515 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 EPGNQ6UW88 154 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 C6orf89Q6UWU4 347 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 UNC5DQ6UXZ4 953 aa26.12■■□□□ 1.77
MSX1-201ENST00000382723 ALYREFQ86V81 257 aaKnown RBP26.12■■□□□ 1.77
MSX1-201ENST00000382723 STOX2Q9P2F5 926 aaPredicted RBP26.12■■□□□ 1.77
MSX1-201ENST00000382723 MEI4A8MW99 385 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 OR7A17O14581 309 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 GIPC1O14908 333 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 KCNJ13O60928 360 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 CRCPO75575 148 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 WDR47O94967 919 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 SLC16A8O95907 504 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 AOC1P19801 751 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 IDSP22304 550 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 CD27P26842 260 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 SERPINB3P29508 390 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 FOXA1P55317 472 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 GPRIN3Q6ZVF9 776 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 HSPA12BQ96MM6 686 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 CAAP1Q9H8G2 361 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 ZNF225Q9UK10 706 aa26.11■■□□□ 1.77
MSX1-201ENST00000382723 PDZK1P1A8MUH7 402 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 DCXO43602 365 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 ITPKAP23677 461 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 PTK2BQ14289 1009 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 AGTRAPQ6RW13 159 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 TRPM8Q7Z2W7 1104 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 MTDHQ86UE4 582 aaKnown RBP26.1■■□□□ 1.77
MSX1-201ENST00000382723 CLYBLQ8N0X4 340 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 SNX31Q8N9S9 440 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 FBXO15Q8NCQ5 510 aaPredicted RBP26.1■■□□□ 1.77
MSX1-201ENST00000382723 PPFIBP2Q8ND30 876 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 ATL1Q8WXF7 558 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 FAR2Q96K12 515 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 ZNF382Q96SR6 550 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 TMEM168Q9H0V1 697 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 MIR1-1HGQ9H1L0 117 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 PCED1AQ9H1Q7 454 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 SLC32A1Q9H598 525 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 WDR55Q9H6Y2 383 aaPredicted RBP26.1■■□□□ 1.77
MSX1-201ENST00000382723 PRDM8Q9NQV8 689 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 TDRKHQ9Y2W6 561 aaKnown RBP26.1■■□□□ 1.77
MSX1-201ENST00000382723 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 GOLGA8QA0A0J9YX86 632 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 GOLGA8OA6NCC3 632 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 CCT8L1PA6NM43 557 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 GOLGA8NF8WBI6 632 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 AZIN1O14977 448 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 KATNA1O75449 491 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 ESRRBO95718 433 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 EPB42P16452 691 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 AK4P27144 223 aaPredicted RBP26.1■■□□□ 1.77
MSX1-201ENST00000382723 SLC6A12P48065 614 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 CTBSQ01459 385 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 PRKG2Q13237 762 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 METTL2BQ6P1Q9 378 aaKnown RBP26.1■■□□□ 1.77
MSX1-201ENST00000382723 DUS1LQ6P1R4 473 aaKnown RBP26.1■■□□□ 1.77
MSX1-201ENST00000382723 TTC23LQ6PF05 361 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 SLC36A4Q6YBV0 504 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 MAMSTRQ6ZN01 415 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 TMEFF1Q8IYR6 380 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 CCL4L1Q8NHW4 92 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 MED8Q96G25 268 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 KLHDC7BQ96G42 594 aa26.1■■□□□ 1.77
MSX1-201ENST00000382723 C12orf66Q96MD2 445 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms