RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 GSTA3Q16772 222 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 SAMD4BQ5PRF9 694 aaKnown RBP16.8■□□□□ 0.28
PDX1-201ENST00000381033 RNF220Q5VTB9 566 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 ELMSAN1Q6PJG2 1045 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 METTL3Q86U44 580 aaKnown RBP16.8■□□□□ 0.28
PDX1-201ENST00000381033 ZNF707Q96C28 371 aaPredicted RBP16.8■□□□□ 0.28
PDX1-201ENST00000381033 IER2Q9BTL4 223 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 OPTCQ9UBM4 332 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 AP4S1Q9Y587 144 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 ANGPTL3Q9Y5C1 460 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 A0A1W2PP18 115 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 FADS2P1A8MWK0 482 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 PLK4O00444 970 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 UQCRBP14927 111 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 HMOX2P30519 316 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 POLR2JP52435 117 aaKnown RBP16.8■□□□□ 0.28
PDX1-201ENST00000381033 KCNK10P57789 538 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 RHDQ02161 417 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 FOLH1Q04609 750 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 PPIGQ13427 754 aaKnown RBP eCLIP16.8■□□□□ 0.28
PDX1-201ENST00000381033 TLR1Q15399 786 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 CPSF6Q16630 551 aaKnown RBP eCLIP16.8■□□□□ 0.28
PDX1-201ENST00000381033 FAM209AQ5JX71 171 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 RNF175Q8N4F7 328 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 ROPN1LQ96C74 230 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 ZNF641Q96N77 438 aaPredicted RBP16.8■□□□□ 0.28
PDX1-201ENST00000381033 BRINP2Q9C0B6 783 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 PFDN4Q9NQP4 134 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 ARL15Q9NXU5 204 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 PRKAG2Q9UGJ0 569 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 CCL27Q9Y4X3 112 aa16.8■□□□□ 0.28
PDX1-201ENST00000381033 TNPO3Q9Y5L0 923 aaKnown RBP16.8■□□□□ 0.28
PDX1-201ENST00000381033 ZFC3H1O60293 1989 aaKnown RBP16.8■□□□□ 0.28
PDX1-201ENST00000381033 CCDC154A6NI56 674 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 TIPRLO75663 272 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 GSTT2P0CG29 244 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 GSTT2BP0CG30 244 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 HLA-EP13747 358 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 TIMP2P16035 220 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 RECQLP46063 649 aaPredicted RBP16.79■□□□□ 0.28
PDX1-201ENST00000381033 RPL38P63173 70 aaKnown RBP16.79■□□□□ 0.28
PDX1-201ENST00000381033 CDKL1Q00532 357 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 DHCR24Q15392 516 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 SPATA19Q7Z5L4 167 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 TMEM151BQ8IW70 566 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 HEPHQ9BQS7 1158 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 MRPS23Q9Y3D9 190 aaKnown RBP16.79■□□□□ 0.28
PDX1-201ENST00000381033 SNX13Q9Y5W8 968 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 NUP214P35658 2090 aaPredicted RBP16.79■□□□□ 0.28
PDX1-201ENST00000381033 A0A0B4J203 849 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 CARNS1A5YM72 827 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 TPST1O60507 370 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 OTCP00480 354 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 SLC2A4P14672 509 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 HMBOX1Q6NT76 420 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 FIP1L1Q6UN15 594 aaKnown RBP16.79■□□□□ 0.28
PDX1-201ENST00000381033 HACD2Q6Y1H2 254 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 DHFR2Q86XF0 187 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 SLC22A15Q8IZD6 547 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 ICA1LQ8NDH6 482 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 CLHC1Q8NHS4 586 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 NXPE3Q969Y0 559 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 RIOK2Q9BVS4 552 aaKnown RBP16.79■□□□□ 0.28
PDX1-201ENST00000381033 ZDHHC7Q9NXF8 308 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 EPS15L1Q9UBC2 864 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 ABCD2Q9UBJ2 740 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 COQ6Q9Y2Z9 468 aa16.79■□□□□ 0.28
PDX1-201ENST00000381033 FAM149AA5PLN7 773 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 HNRNPRO43390 633 aaKnown RBP16.78■□□□□ 0.28
PDX1-201ENST00000381033 VPS4BO75351 444 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 S100A1P23297 94 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 AOAHP28039 575 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 OXTRP30559 389 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 SLC6A11P48066 632 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 OR52E8Q6IFG1 317 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 ZFP1Q6P2D0 407 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 CYP20A1Q6UW02 462 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 UBE2R2Q712K3 238 aaPredicted RBP16.78■□□□□ 0.28
PDX1-201ENST00000381033 C7orf61Q8IZ16 206 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 P2RY13Q9BPV8 354 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 CEP44Q9C0F1 390 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 ATG10Q9H0Y0 220 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 PCDHA9Q9Y5H5 950 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 IGLV3-16A0A075B6K0 115 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 MYOCOSA0A1B0GUC4 107 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 BBIP1A8MTZ0 92 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 PRRT4C9JH25 899 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 CYP17A1P05093 508 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 C8BP07358 591 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 ATP1B2P14415 290 aaPredicted RBP16.78■□□□□ 0.28
PDX1-201ENST00000381033 SELPLGQ14242 412 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 MTX3Q5HYI7 312 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 C6orf52Q5T4I8 152 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 LYPLAL1Q5VWZ2 237 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 RALGPS2Q86X27 583 aaPredicted RBP16.78■□□□□ 0.28
PDX1-201ENST00000381033 TICAM1Q8IUC6 712 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 MINDY1Q8N5J2 469 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 TMEM125Q96AQ2 219 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 PPM1MQ96MI6 270 aa16.78■□□□□ 0.28
PDX1-201ENST00000381033 WRAP53Q9BUR4 548 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms