RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 RPS17P08708 135 aaKnown RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 RBP1P09455 135 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 PAMP19021 973 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 CD9P21926 228 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 TEAD1P28347 426 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 ATP6V0D1P61421 351 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 RALGDSQ12967 914 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 FASTKQ14296 549 aaKnown RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 FAM83EQ2M2I3 478 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 GRAMD1BQ3KR37 738 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 C2orf27AQ580R0 203 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 MTX3Q5HYI7 312 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 AGAP9Q5VTM2 703 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 CLEC6AQ6EIG7 209 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 SDE2Q6IQ49 451 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 LCN8Q6JVE9 175 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 OGFOD2Q6N063 350 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 SPATA24Q86W54 205 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 TTC30BQ8N4P2 665 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 SORCS1Q8WY21 1168 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 LPGAT1Q92604 370 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 TFAP2CQ92754 450 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 C19orf60Q96EN9 201 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 COQ10BQ9H8M1 238 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 NLE1Q9NVX2 485 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 EVLQ9UI08 416 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 CDV3Q9UKY7 258 aaKnown RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 DMTF1Q9Y222 760 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 OR51F1A6NGY5 319 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 SOCS2O14508 198 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 SIAH2O43255 324 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 SNRPB2P08579 225 aaKnown RBP7.57□□□□□ -1.2
CDKL5-202ENST00000379996 PCSK2P16519 638 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 ZNF23P17027 643 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 CDH2P19022 906 aaPredicted RBP7.57□□□□□ -1.2
CDKL5-202ENST00000379996 GRNP28799 593 aaKnown RBP7.57□□□□□ -1.2
CDKL5-202ENST00000379996 HMGCLP35914 325 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 KPNA2P52292 529 aaKnown RBP7.57□□□□□ -1.2
CDKL5-202ENST00000379996 ITKQ08881 620 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 SPATS1Q496A3 300 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 INTS11Q5TA45 600 aaKnown RBP7.57□□□□□ -1.2
CDKL5-202ENST00000379996 ZNF776Q68DI1 518 aaPredicted RBP7.57□□□□□ -1.2
CDKL5-202ENST00000379996 SERPINA13PQ6UXR4 307 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 ZNF765Q7L2R6 523 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 ERMP1Q7Z2K6 904 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 SPRED1Q7Z699 444 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 ZSWIM9Q86XI8 627 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 CALML6Q8TD86 181 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 TRIM4Q9C037 500 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 BRINP2Q9C0B6 783 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 TNKS2Q9H2K2 1166 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 AKTIPQ9H8T0 292 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 CCM2LQ9NUG4 571 aaPredicted RBP7.57□□□□□ -1.2
CDKL5-202ENST00000379996 CMTM6Q9NX76 183 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 G3BP2Q9UN86 482 aaKnown RBP7.57□□□□□ -1.2
CDKL5-202ENST00000379996 GPR45Q9Y5Y3 372 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 PTGDR2Q9Y5Y4 395 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 AK5Q9Y6K8 562 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 UPK3BL1B0FP48 263 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 UPK3BL2E5RIL1 263 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 AREL1O15033 823 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 UBDO15205 165 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 NRP2O60462 931 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 LEFTY1O75610 366 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 CYP2A6P11509 494 aaPredicted RBP7.57□□□□□ -1.2
CDKL5-202ENST00000379996 POLE2P56282 527 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 RPS14P62263 151 aaKnown RBP7.57□□□□□ -1.2
CDKL5-202ENST00000379996 SIGLEC14Q08ET2 396 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 GRB7Q14451 532 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 NEK5Q6P3R8 708 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 RBM44Q6ZP01 1051 aaKnown RBP7.57□□□□□ -1.2
CDKL5-202ENST00000379996 USP45Q70EL2 814 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 NRSN1Q8IZ57 195 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 CHST14Q8NCH0 376 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 PJA1Q8NG27 643 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 SGF29Q96ES7 293 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 EML4Q9HC35 981 aaKnown RBP7.57□□□□□ -1.2
CDKL5-202ENST00000379996 PGPEP1Q9NXJ5 209 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 ETAA1Q9NY74 926 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 AP4S1Q9Y587 144 aa7.57□□□□□ -1.2
CDKL5-202ENST00000379996 LRRC14BA6NHZ5 514 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 AGAP14A8MT82 685 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 SPINT1O43278 529 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 TIMP2P16035 220 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 OGNP20774 298 aaKnown RBP7.56□□□□□ -1.2
CDKL5-202ENST00000379996 SAT1P21673 171 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 VIPR1P32241 457 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 MMP12P39900 470 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 RPS6KA3P51812 740 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 DGKEP52429 567 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 FOXM1Q08050 763 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 ELP6Q0PNE2 266 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 DYNC1I2Q13409 638 aaKnown RBP7.56□□□□□ -1.2
CDKL5-202ENST00000379996 ATP6AP1Q15904 470 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 LDB1Q86U70 411 aaPredicted RBP7.56□□□□□ -1.2
CDKL5-202ENST00000379996 ZNF295-AS1Q8N0V1 137 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 STK40Q8N2I9 435 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 CCNYL1Q8N7R7 359 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 SNX31Q8N9S9 440 aa7.56□□□□□ -1.2
CDKL5-202ENST00000379996 EDAQ92838 391 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms