RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 ENDOVQ8N8Q3 282 aaKnown RBP17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 SLC7A6OSQ96CW6 309 aaPredicted RBP17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 FOPNLQ96NB1 174 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 TUBB1Q9H4B7 451 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 LNPEPQ9UIQ6 1025 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 G3BP2Q9UN86 482 aaKnown RBP17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 PIP5K1BO14986 540 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 OTCP00480 354 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 CATP04040 527 aaKnown RBP17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 MYCLP1P12525 358 aaPredicted RBP17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 MAPK9P45984 424 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 TMEM31Q5JXX7 168 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 LETMD1Q6P1Q0 360 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 ZNF687Q8N1G0 1237 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 ASB12Q8WXK4 309 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 C3orf30Q96M34 536 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 CATSPER2Q96P56 530 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 MYOCQ99972 504 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 NUSAP1Q9BXS6 441 aaKnown RBP17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 BTBD1Q9H0C5 482 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 POLMQ9NP87 494 aaPredicted RBP17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 PTGDR2Q9Y5Y4 395 aa17.12■□□□□ 0.33
LYSMD4-203ENST00000378904 ATP6AP2A0A1C7CYW4 349 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 HNRNPCL1O60812 293 aaKnown RBP17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 ATP6AP2O75787 350 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 BDKRB1P46663 353 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 RASSF2P50749 326 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 PLOD1Q02809 727 aaPredicted RBP17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 PRKCQQ04759 706 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 TRAF3Q13114 568 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 FAM83HQ6ZRV2 1179 aaPredicted RBP17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 AMZ2Q86W34 360 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 DDIASQ8IXT1 998 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 CDYL2Q8N8U2 506 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 FAM13CQ8NE31 585 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 OR4F6Q8NGB9 312 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 DPEP2Q9H4A9 486 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 SLC32A1Q9H598 525 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 LMAN1LQ9HAT1 526 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 SLC23A2Q9UGH3 650 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 EBF1Q9UH73 591 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 TAGLN3Q9UI15 199 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 BTRCQ9Y297 605 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 GPR89AB7ZAQ6 455 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 GPR89BP0CG08 455 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 EPB42P16452 691 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 SLC6A12P48065 614 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 CCSMST1Q4G0I0 132 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 TTC23LQ6PF05 361 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 PGBD3Q8N328 593 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 FBXL8Q96CD0 374 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 MARK4Q96L34 752 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 ZNF385DQ9H6B1 395 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 ITM2CQ9NQX7 267 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 TM7SF3Q9NS93 570 aa17.11■□□□□ 0.33
LYSMD4-203ENST00000378904 KATNA1O75449 491 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 CHEK2O96017 543 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 CPA2P48052 419 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 PIK3CGP48736 1102 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 CCR3P51677 355 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 DGKEP52429 567 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 PTCHD3Q3KNS1 767 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 LARP4Q71RC2 724 aaKnown RBP eCLIP17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 SYT13Q7L8C5 426 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 LRRC70Q7Z2Q7 622 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 EFL1Q7Z2Z2 1120 aaKnown RBP17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 MILR1Q7Z6M3 343 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 TRIM69Q86WT6 500 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 SYNPOQ8N3V7 929 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 OXR1Q8N573 874 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 CPSF7Q8N684 471 aaKnown RBP17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 OR2T34Q8NGX1 318 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 APOOQ9BUR5 198 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 PRDM6Q9NQX0 595 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 ZNHIT2Q9UHR6 403 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 ST14Q9Y5Y6 855 aa17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 DNMT3AQ9Y6K1 912 aaPredicted RBP17.1■□□□□ 0.33
LYSMD4-203ENST00000378904 LRRC72A6NJI9 287 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 CHURC1-FNTBB4DL54 471 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 KMOO15229 486 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 WDR47O94967 919 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 C1orf105O95561 183 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 CAPN1P07384 714 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 LINC00032P0C843 101 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 CALRP27797 417 aaKnown RBP17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 PTPN4P29074 926 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 CDC16Q13042 620 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 KLF10Q13118 480 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 WASHC2DQ5SRD0 308 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 ANO7Q6IWH7 933 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 CHSY3Q70JA7 882 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 PYCR2Q96C36 320 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 CCDC138Q96M89 665 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 NTMT1Q9BV86 223 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 ATG10Q9H0Y0 220 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 AKTIPQ9H8T0 292 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 USP36Q9P275 1121 aaKnown RBP17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 KRBA1A5PL33 1030 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 FUCA1P04066 466 aa17.09■□□□□ 0.33
LYSMD4-203ENST00000378904 LRRC32Q14392 662 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms