RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 OR7A2PQ8NGA2 310 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 OR2T11Q8NH01 316 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 COMMD8Q9NX08 183 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 CMTM6Q9NX76 183 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 C6orf203Q9P0P8 240 aaPredicted RBP11.43□□□□□ -0.58
DDR1-227ENST00000376570 KNTC1P50748 2209 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 LCHNA4D1U4 455 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 OCM2P0CE71 109 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 OCMP0CE72 109 aaPredicted RBP11.43□□□□□ -0.58
DDR1-227ENST00000376570 CYP2A7P20853 494 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 HLA-FP30511 346 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 OR1E2P47887 323 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 HK3P52790 923 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 PLA2G16P53816 162 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 LHX8Q68G74 356 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 ADNP2Q6IQ32 1131 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 SMYD1Q8NB12 490 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 VANGL1Q8TAA9 524 aaPredicted RBP11.43□□□□□ -0.58
DDR1-227ENST00000376570 ZFRQ96KR1 1074 aaKnown RBP11.43□□□□□ -0.58
DDR1-227ENST00000376570 RHCGQ9UBD6 479 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 KLHL20Q9Y2M5 609 aa11.43□□□□□ -0.58
DDR1-227ENST00000376570 TNS1Q9HBL0 1735 aaKnown RBP11.42□□□□□ -0.58
DDR1-227ENST00000376570 FER1L6Q2WGJ9 1857 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 RFXAPO00287 272 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 TSPAN6O43657 245 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 SERPINA1P01009 418 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 ESR1P03372 595 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 PCSK6P29122 969 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 EIF2B2P49770 351 aaKnown RBP11.42□□□□□ -0.58
DDR1-227ENST00000376570 ERVFC1P60507 584 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 CNTN1Q12860 1018 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 TP53BP2Q13625 1128 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 TRIM16LQ309B1 348 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 FGD3Q5JSP0 725 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 CTSL3PQ5NE16 218 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 PDE12Q6L8Q7 609 aaKnown RBP11.42□□□□□ -0.58
DDR1-227ENST00000376570 BADQ92934 168 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 MAL2Q969L2 176 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 TFB2MQ9H5Q4 396 aaKnown RBP11.42□□□□□ -0.58
DDR1-227ENST00000376570 XKR8Q9H6D3 395 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 ACSL6Q9UKU0 697 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 RAB23Q9ULC3 237 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 TESMINQ9Y4I5 508 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 SERPINI2O75830 405 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 PGLSO95336 258 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 PRLP01236 227 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 RPLP2P05387 115 aaKnown RBP11.42□□□□□ -0.58
DDR1-227ENST00000376570 CLTBP09497 229 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 POLR2IP36954 125 aaKnown RBP11.42□□□□□ -0.58
DDR1-227ENST00000376570 TM4SF4P48230 202 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 C21orf59P57076 290 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 LSAMPQ13449 338 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 ENPP6Q6UWR7 440 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 CYP2U1Q7Z449 544 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 VRK3Q8IV63 474 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 FUNDC1Q8IVP5 155 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 STK40Q8N2I9 435 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 ZNF784Q8NCA9 323 aaPredicted RBP11.42□□□□□ -0.58
DDR1-227ENST00000376570 ZFAND2BQ8WV99 257 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 GLMNQ92990 594 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 MKS1Q9NXB0 559 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 MTRRQ9UBK8 725 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 LOC100506127A0A0U1RQW1 187 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 ANKDD1BA6NHY2 528 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 DEAF1O75398 565 aaPredicted RBP11.42□□□□□ -0.58
DDR1-227ENST00000376570 IRS1P35568 1242 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 MAGEA11P43364 429 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 METAP1P53582 386 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 BNIP3Q12983 259 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 HEATR4Q86WZ0 1026 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 MICU2Q8IYU8 434 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 BIRC7Q96CA5 298 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 EMILIN2Q9BXX0 1053 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 TDP1Q9NUW8 608 aa11.42□□□□□ -0.58
DDR1-227ENST00000376570 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.42□□□□□ -0.58
DDR1-227ENST00000376570 LOXHD1Q8IVV2 1947 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 C5orf58C9J3I9 102 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 BCAS2O75934 225 aaPredicted RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 FGBP02675 491 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 RHOP08100 348 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 HMGA1P17096 107 aaKnown RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 OGNP20774 298 aaKnown RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 TACR1P25103 407 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 FMO3P31513 532 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 RPS26P62854 115 aaKnown RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 CCSMST1Q4G0I0 132 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 C22orf39Q6P5X5 142 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 SLC39A5Q6ZMH5 540 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 CLECL1Q8IZS7 167 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 SLC13A3Q8WWT9 602 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 SUSD6Q92537 303 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 PLD4Q96BZ4 506 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 INPP5KQ9BT40 448 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 TRMOQ9BU70 441 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 BDH2Q9BUT1 245 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 ADI1Q9BV57 179 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 TMEM121BQ9BXQ6 578 aaPredicted RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 MRPS26Q9BYN8 205 aaKnown RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 UTS2RQ9UKP6 389 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 PRUNE2Q8WUY3 3088 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms