RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 OR1E2P47887 323 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 PLA2G16P53816 162 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 RPS14P62263 151 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 IHHQ14623 411 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ATP6AP1Q15904 470 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 C6orf141Q5SZD1 244 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 NCSTNQ92542 709 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 GTPBP3Q969Y2 492 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 L3HYPDHQ96EM0 354 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 RBM4BQ9BQ04 359 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 RBM4Q9BWF3 364 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 KATNBL1Q9H079 304 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 MTRRQ9UBK8 725 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 SCML2Q9UQR0 700 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 GLYATL1P3A0A0U1RQE8 302 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 CREG1O75629 220 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 HSD17B1P14061 328 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 KIR3DL1P43629 444 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 PRKCZQ05513 592 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 SLC36A3Q495N2 470 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ZNF648Q5T619 568 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ZNF773Q6PK81 442 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ZNF467Q7Z7K2 595 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 BEND7Q8N7W2 519 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 TTC29Q8NA56 475 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 INPP5KQ9BT40 448 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 SMG9Q9H0W8 520 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ARMC1Q9NVT9 282 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 DNAJB9Q9UBS3 223 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 MKI67P46013 3256 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 H3BN98 237 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ENO2P09104 434 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 UMPSP11172 480 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 CHI3L1P36222 383 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 PIGAP37287 484 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 CSKP41240 450 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 CHIT1Q13231 466 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 C6orf183Q5T699 404 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 Q6ZPB1 254 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 Q6ZSR9 355 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 P2RY8Q86VZ1 359 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 RBFAQ8N0V3 343 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 LZICQ8WZA0 190 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 APOL4Q9BPW4 351 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ATAD3AQ9NVI7 634 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 VPS51Q9UID3 782 aa14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ASCC3Q8N3C0 2202 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1B-201ENST00000376259 FPGTO14772 594 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CLDN11O75508 207 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RPS3AP61247 264 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CRHR2Q13324 411 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SPDYE7PQ495Y7 208 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RTP2Q5QGT7 225 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RSBN1Q5VWQ0 802 aaPredicted RBP14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 OR5AK3PQ8NH89 298 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RAB2BQ8WUD1 216 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RPL3LQ92901 407 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 COPS8Q99627 209 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MAGEH1Q9H213 219 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CSNK1G1Q9HCP0 422 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 GNPTGQ9UJJ9 305 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 LTBP1Q14766 1721 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MTMR11A4FU01 709 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 C2orf78A6NCI8 922 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SLC38A8A6NNN8 435 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CLPXO76031 633 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PAPSS2O95340 614 aaPredicted RBP14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 VIPP01282 170 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 KRT8P05787 483 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 FCGRTP55899 365 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 NAE1Q13564 534 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RAPSNQ13702 412 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RCAN2Q14206 197 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 LDLRAD1Q5T700 205 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 INTS11Q5TA45 600 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZBTB2Q8N680 514 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 C7orf57Q8NEG2 295 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 VPS37AQ8NEZ2 397 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 NETO1Q8TDF5 533 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MRM3Q9HC36 420 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MAGEE1Q9HCI5 957 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 FAM118AQ9NWS6 357 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 LSM7Q9UK45 103 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CORINQ9Y5Q5 1042 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZNF197O14709 1029 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TPST2O60704 377 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 APOA1P02647 267 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ESR1P03372 595 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MMP2P08253 660 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 HK3P52790 923 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MXD1Q05195 221 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 GANABQ14697 944 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 BHLHA9Q7RTU4 235 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TICAM1Q8IUC6 712 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 STK40Q8N2I9 435 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZFYVE19Q96K21 471 aa14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TMA7Q9Y2S6 64 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1B-201ENST00000376259 GLTPD2A6NH11 291 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CD36P16671 472 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PTGER3P43115 390 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms