RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 IFNW1P05000 195 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 ASMTP46597 345 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 NAA20P61599 178 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 ID2Q02363 134 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 TAPBPLQ9BX59 468 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 FBXL12Q9NXK8 326 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 DMTF1Q9Y222 760 aa16.85■□□□□ 0.29
MCF2L-203ENST00000375604 CXCR6O00574 342 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 FCER2P06734 321 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 ABATP80404 500 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 SLC22A15Q8IZD6 547 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 CBR4Q8N4T8 237 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 PJA1Q8NG27 643 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 KCNC2Q96PR1 638 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 IFT27Q9BW83 186 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 A0A0D9SEW6 157 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 RIIAD1A6NNX1 92 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 FADS2P1A8MWK0 482 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 SUSD1Q6UWL2 747 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 FAM13CQ8NE31 585 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 CHCHD6Q9BRQ6 235 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 ING3Q9NXR8 418 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 SLC22A14Q9Y267 594 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 CDC7O00311 574 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 PCDH7O60245 1069 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 FGF18O76093 207 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 TBC1D21Q8IYX1 336 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 KBTBD8Q8NFY9 601 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 IRAK2O43187 625 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 C8GP07360 202 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 PPIBP23284 216 aaKnown RBP16.84■□□□□ 0.29
MCF2L-203ENST00000375604 CDKN1CP49918 316 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-203ENST00000375604 ENPEPQ07075 957 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 TARDBPQ13148 414 aaKnown RBP eCLIP16.84■□□□□ 0.29
MCF2L-203ENST00000375604 MLIPQ5VWP3 458 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 ARHGAP22Q7Z5H3 698 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 COX4I2Q96KJ9 171 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 GATA5Q9BWX5 397 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-203ENST00000375604 PLEKHA1Q9HB21 404 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 CCNB2O95067 398 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 TYRP14679 529 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 AZGP1P25311 298 aaKnown RBP16.84■□□□□ 0.29
MCF2L-203ENST00000375604 MEF2AQ02078 507 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-203ENST00000375604 SLC9A4Q6AI14 798 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 CNKSR3Q6P9H4 555 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 CERS6Q6ZMG9 384 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 SLC39A3Q9BRY0 314 aa16.84■□□□□ 0.29
MCF2L-203ENST00000375604 ZNF395Q9H8N7 513 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-203ENST00000375604 NR2F6P10588 404 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 STAT5AP42229 794 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 PTGER3P43115 390 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 EIF1AXP47813 144 aaKnown RBP16.83■□□□□ 0.29
MCF2L-203ENST00000375604 TOR1AIP1Q5JTV8 583 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 C12orf76Q8N812 135 aaPredicted RBP16.83■□□□□ 0.29
MCF2L-203ENST00000375604 PIK3C2AO00443 1686 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 LCA5LO95447 670 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 ALPPL2P10696 532 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 HOXC12P31275 282 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 CAPGP40121 348 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 GALK1P51570 392 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 ODF4Q2M2E3 257 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 ARL10Q8N8L6 244 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 PHC3Q8NDX5 983 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 TLR9Q9NR96 1032 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 CKLFQ9UBR5 152 aa16.83■□□□□ 0.29
MCF2L-203ENST00000375604 ECI2O75521 394 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 TNFP01375 233 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 SLC39A4Q6P5W5 647 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 MIPEPQ99797 713 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 TPD52L2O43399 206 aaKnown RBP16.83■□□□□ 0.28
MCF2L-203ENST00000375604 CLCN7P51798 805 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 PPP1R8Q12972 351 aaKnown RBP16.83■□□□□ 0.28
MCF2L-203ENST00000375604 ADGRE1Q14246 886 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 RNF220Q5VTB9 566 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 OR6K6Q8NGW6 343 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 ARHGAP39Q9C0H5 1083 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 RGS17Q9UGC6 210 aaPredicted RBP16.83■□□□□ 0.28
MCF2L-203ENST00000375604 TELO2Q9Y4R8 837 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 GRXCR1A8MXD5 290 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 SMAD9O15198 467 aaKnown RBP16.83■□□□□ 0.28
MCF2L-203ENST00000375604 CNTN5O94779 1100 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 GADD45GO95257 159 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 GNSP15586 552 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 PLGLB1Q02325 96 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 CHAF1BQ13112 559 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 PUM1Q14671 1186 aaKnown RBP eCLIP16.83■□□□□ 0.28
MCF2L-203ENST00000375604 LIN54Q6MZP7 749 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 PRDM8Q9NQV8 689 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 CDH7Q9ULB5 785 aa16.83■□□□□ 0.28
MCF2L-203ENST00000375604 RBMX2Q9Y388 322 aaKnown RBP16.83■□□□□ 0.28
MCF2L-203ENST00000375604 WFS1O76024 890 aa16.82■□□□□ 0.28
MCF2L-203ENST00000375604 STARP49675 285 aa16.82■□□□□ 0.28
MCF2L-203ENST00000375604 LRRC66Q68CR7 880 aa16.82■□□□□ 0.28
MCF2L-203ENST00000375604 RASSF6Q6ZTQ3 369 aa16.82■□□□□ 0.28
MCF2L-203ENST00000375604 SPATC1Q76KD6 591 aa16.82■□□□□ 0.28
MCF2L-203ENST00000375604 PIGXQ8TBF5 258 aa16.82■□□□□ 0.28
MCF2L-203ENST00000375604 HPS1Q92902 700 aa16.82■□□□□ 0.28
MCF2L-203ENST00000375604 NKD2Q969F2 451 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-203ENST00000375604 RBM4BQ9BQ04 359 aaKnown RBP16.82■□□□□ 0.28
MCF2L-203ENST00000375604 RBM4Q9BWF3 364 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms