RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ZFP14Q9HCL3 533 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 FBRSL1Q9HCM7 1045 aaKnown RBP11.93□□□□□ -0.5
C9orf3-203ENST00000375315 SCN3BQ9NY72 215 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 C3orf18Q9UK00 162 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 VANGL2Q9ULK5 521 aa11.93□□□□□ -0.5
C9orf3-203ENST00000375315 ZCWPW2A0A1B0GU75 182 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 LOC100130705A0A1B0GUX0 176 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 ATP6AP2A0A1C7CYW4 349 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 HHLA1C9JL84 531 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 LOC110117498-PIK3R3F6TDL0 507 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 UPK1AO00322 258 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 ATP6AP2O75787 350 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 PRSS23O95084 383 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 EPN2O95208 641 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 PCNAP12004 261 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 ITGA2P17301 1181 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 EEFSECP57772 596 aaKnown RBP11.92□□□□□ -0.5
C9orf3-203ENST00000375315 GPR50Q13585 617 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 FAM83EQ2M2I3 478 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 FAM98BQ52LJ0 330 aaKnown RBP11.92□□□□□ -0.5
C9orf3-203ENST00000375315 SPANXN2Q5MJ10 180 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 LAIR2Q6ISS4 152 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 FAM171BQ6P995 826 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 LARP4Q71RC2 724 aaKnown RBP eCLIP11.92□□□□□ -0.5
C9orf3-203ENST00000375315 ZNF767PQ75MW2 155 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 SPRED2Q7Z698 418 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 NECAB2Q7Z6G3 386 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 DNAAF3Q8N9W5 541 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 OR52K1Q8NGK4 314 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 DNAJB14Q8TBM8 379 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 TMCO6Q96DC7 493 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 TMEM169Q96HH4 297 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 PCDHGA10Q9Y5H3 936 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 MAGED1Q9Y5V3 778 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-203ENST00000375315 SZT2Q5T011 3432 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 CTDSP2O14595 271 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 ZNF780AO75290 641 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-203ENST00000375315 DBTP11182 482 aaKnown RBP11.92□□□□□ -0.5
C9orf3-203ENST00000375315 PIGAP37287 484 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 MTHFRP42898 656 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 SLC15A1P46059 708 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 CSRP3P50461 194 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 IL5RAQ01344 420 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 CHRNB3Q05901 458 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 IL18R1Q13478 541 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 RPS6KA2Q15349 733 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 COQ5Q5HYK3 327 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 OTUD1Q5VV17 481 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-203ENST00000375315 SMYD5Q6GMV2 418 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 ZC3HC1Q86WB0 502 aaKnown RBP11.92□□□□□ -0.5
C9orf3-203ENST00000375315 RIMKLAQ8IXN7 391 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 DCP1BQ8IZD4 617 aaKnown RBP11.92□□□□□ -0.5
C9orf3-203ENST00000375315 TMEM199Q8N511 208 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 DNAJC5GQ8N7S2 189 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 REXO5Q96IC2 774 aaKnown RBP11.92□□□□□ -0.5
C9orf3-203ENST00000375315 CSPG4P5Q96PW8 444 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 RBM4BQ9BQ04 359 aaKnown RBP11.92□□□□□ -0.5
C9orf3-203ENST00000375315 C17orf62Q9BQA9 187 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 TTPALQ9BTX7 342 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 RBM4Q9BWF3 364 aaKnown RBP11.92□□□□□ -0.5
C9orf3-203ENST00000375315 SMURF2Q9HAU4 748 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 OSER1Q9NX31 292 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 PCDHB5Q9Y5E4 795 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 PEX16Q9Y5Y5 336 aa11.92□□□□□ -0.5
C9orf3-203ENST00000375315 EEF2KO00418 725 aaKnown RBP11.91□□□□□ -0.5
C9orf3-203ENST00000375315 OR7A10O76100 309 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 RBP1P09455 135 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 RAP2AP10114 183 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 RYKP34925 604 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 ZNF691Q5VV52 312 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 ANKRD33Q7Z3H0 272 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 KDELC2Q7Z4H8 507 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 ZDHHC17Q8IUH5 632 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 HID1Q8IV36 788 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 TP53I13Q8NBR0 393 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-203ENST00000375315 PJA1Q8NG27 643 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 FBXO32Q969P5 355 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 PMEPA1Q969W9 287 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 ZSCAN5AQ9BUG6 496 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 LTB4R2Q9NPC1 389 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 ENTPD7Q9NQZ7 604 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 POLR3BQ9NW08 1133 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-203ENST00000375315 MPP6Q9NZW5 540 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 CXXC1Q9P0U4 656 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-203ENST00000375315 TBX21Q9UL17 535 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 TYW5A2RUC4 315 aaKnown RBP11.91□□□□□ -0.5
C9orf3-203ENST00000375315 AP3D1O14617 1153 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 SSX4O60224 188 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 ATF4P18848 351 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-203ENST00000375315 ERP29P30040 261 aaKnown RBP11.91□□□□□ -0.5
C9orf3-203ENST00000375315 UQCRC1P31930 480 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 TAF10Q12962 218 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 CDK5R2Q13319 367 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 TRIP4Q15650 581 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-203ENST00000375315 BCL7AQ4VC05 210 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 RABL3Q5HYI8 236 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 SLC41A1Q8IVJ1 513 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 FBXO22Q8NEZ5 403 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 TRIM8Q9BZR9 551 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 PRKAG2Q9UGJ0 569 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms