RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 SMTNL2Q2TAL5 461 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 SMARCD3Q6STE5 483 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 OR4D10Q8NGI6 311 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 RBPMSQ93062 196 aaKnown RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 TSPAN15O95858 294 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 AFF3P51826 1226 aaKnown RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 SMSP52788 366 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 AP5B1Q2VPB7 878 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 TRAPPC3LQ5T215 181 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 ALG1LQ6GMV1 187 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 FAM83HQ6ZRV2 1179 aaPredicted RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 DCP1BQ8IZD4 617 aaKnown RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 RBM22Q9NW64 420 aaKnown RBP eCLIP6.51□□□□□ -1.372e-6■■■■■ 36.1
UBR4-204ENST00000375254 HCN4Q9Y3Q4 1203 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 TOX4O94842 621 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 ERVFC1P60507 584 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 EEF1A1P68104 462 aaKnown RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 EEF1A2Q05639 463 aaKnown RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 ZNF674Q2M3X9 581 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 EEF1A1P5Q5VTE0 462 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 SAMD12Q8N8I0 201 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 PEX13Q92968 403 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 OTUB2Q96DC9 234 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 SEC22CQ9BRL7 303 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 EMC7Q9NPA0 242 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 ZIM2Q9NZV7 527 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 LRRC72A6NJI9 287 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 TPT1P13693 172 aaKnown RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 TOB1P50616 345 aaPredicted RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 CHRNEQ04844 493 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 HNF4GQ14541 408 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 C10orf62Q5T681 223 aaPredicted RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 TRIM48Q8IWZ4 208 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 DNAJC22Q8N4W6 341 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 ATP13A2Q9NQ11 1180 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 GTF2IRD1Q9UHL9 959 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 MAGEB4O15481 346 aaPredicted RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 ACADMP11310 421 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 PRPS2P11908 318 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 GPR19Q15760 415 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 CCNJQ5T5M9 372 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 KCTD20Q7Z5Y7 419 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 NT5DC4Q86YG4 428 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 PHF13Q86YI8 300 aaPredicted RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 SIAH1Q8IUQ4 282 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 RAB3CQ96E17 227 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 OR4K3Q96R72 315 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 A0A0G2JMP0 313 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 CYTIPO60759 359 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 OGDHQ02218 1023 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 POU4F2Q12837 409 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 KCTD2Q14681 263 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 QRICH1Q2TAL8 776 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 ZNF697Q5TEC3 545 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 MARC1Q5VT66 337 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 LINGO2Q7L985 606 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 ZER1Q7Z7L7 766 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 OR4M2Q8NGB6 313 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 OR2T35Q8NGX2 323 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 CRLS1Q9UJA2 301 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 CBY3A6NI87 242 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 RBBP9O75884 186 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 CYP2F1P24903 491 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 AVPR1AP37288 418 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 ATP4BP51164 291 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 UPP1Q16831 310 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 MED18Q9BUE0 208 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 TMPRSS5Q9H3S3 457 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 SMURF1Q9HCE7 757 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 NR2F1P10589 423 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 MGAT1P26572 445 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 HOXC9P31274 260 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 SLC39A4Q6P5W5 647 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 CLRN3Q8NCR9 226 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 ATG5Q9H1Y0 275 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 MAGIXQ9H6Y5 334 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 FAM96BQ9Y3D0 163 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 ZNF143P52747 638 aaPredicted RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 PCSK7Q16549 785 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 NIPA1Q7RTP0 329 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 OR2L3Q8NG85 312 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 SLC7A13Q8TCU3 470 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 ABCG5Q9H222 651 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 OR51J1Q9H342 316 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 EGFL7Q9UHF1 273 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 HACL1Q9UJ83 578 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 MEIOCA2RUB1 952 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 UROSP10746 265 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 MSX2P35548 267 aaPredicted RBP6.51□□□□□ -1.37
UBR4-204ENST00000375254 CBWD3Q5JTY5 395 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 CBWD5Q5RIA9 395 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 SPOCK2Q92563 424 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 USP7Q93009 1102 aa6.51□□□□□ -1.37
UBR4-204ENST00000375254 GCATO75600 419 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 DIRAS1O95057 198 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 SLC17A1Q14916 467 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 HSDL1Q3SXM5 330 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 KIF12Q96FN5 646 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 YIPF4Q9BSR8 244 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 LMAN2LQ9H0V9 348 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms