RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 EXT2Q93063 718 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 C12orf42Q96LP6 360 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 NIPAL2Q9H841 368 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 MUTYHQ9UIF7 546 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 GRXCR2A6NFK2 248 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 DFNA5O60443 496 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 ALPPP05187 535 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 ACADMP11310 421 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 ICAM2P13598 275 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 MSH3P20585 1137 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 GPR158Q5T848 1215 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 NDUFAF5Q5TEU4 345 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 TIGD3Q6B0B8 471 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 ACOT1Q86TX2 421 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 CHPFQ8IZ52 775 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 BLOC1S5Q8TDH9 187 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 TEKT5Q96M29 485 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 NSUN5Q96P11 429 aaKnown RBP12.66□□□□□ -0.38
PRPF4-201ENST00000374198 TM9SF2Q99805 663 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 KCNS3Q9BQ31 491 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 AS3MTQ9HBK9 375 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 PTPRHQ9HD43 1115 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 RASSF1Q9NS23 344 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 ZIM2Q9NZV7 527 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 AP3M1Q9Y2T2 418 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 DOCK5Q9H7D0 1870 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 LINC00854A0A1B0GVQ3 168 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 LACTBL1A8MY62 500 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 H3BUI4 141 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 NCAM2O15394 837 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 STX7O15400 261 aaKnown RBP12.66□□□□□ -0.38
PRPF4-201ENST00000374198 CYP7B1O75881 506 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 LCP1P13796 627 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 ERCC2P18074 760 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 PTPRAP18433 802 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 POU3F3P20264 500 aaPredicted RBP12.66□□□□□ -0.38
PRPF4-201ENST00000374198 MYL9P24844 172 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 CSTF2P33240 577 aaKnown RBP eCLIP12.66□□□□□ -0.38
PRPF4-201ENST00000374198 GNPDA1P46926 289 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 SULT1E1P49888 294 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 BAK1Q16611 211 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 DET1Q7L5Y6 550 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 TSPYL5Q86VY4 417 aaPredicted RBP12.66□□□□□ -0.38
PRPF4-201ENST00000374198 ZFAND4Q86XD8 727 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 LILRB1Q8NHL6 650 aaPredicted RBP12.66□□□□□ -0.38
PRPF4-201ENST00000374198 UBASH3BQ8TF42 649 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 BRI3BPQ8WY22 251 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 TOE1Q96GM8 510 aaKnown RBP12.66□□□□□ -0.38
PRPF4-201ENST00000374198 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 NECTIN4Q96NY8 510 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.66□□□□□ -0.38
PRPF4-201ENST00000374198 KLHL21Q9UJP4 597 aa12.66□□□□□ -0.38
PRPF4-201ENST00000374198 NDRG4Q9ULP0 352 aaKnown RBP12.66□□□□□ -0.38
PRPF4-201ENST00000374198 SEC22BO75396 215 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 WBP4O75554 376 aaKnown RBP12.65□□□□□ -0.38
PRPF4-201ENST00000374198 PRLP01236 227 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 C1QBP02746 253 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 CCNYL3P0C7X3 344 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 ADORA3P0DMS8 318 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 CYP2C8P10632 490 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 PAMP19021 973 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 CFL1P23528 166 aaKnown RBP12.65□□□□□ -0.38
PRPF4-201ENST00000374198 TALDO1P37837 337 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 CLCN5P51795 746 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 HYAL2Q12891 473 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 TBCEQ15813 527 aaPredicted RBP12.65□□□□□ -0.38
PRPF4-201ENST00000374198 STK11Q15831 433 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 PROX2Q3B8N5 592 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 HECTD2Q5U5R9 776 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 ATF7IP2Q5U623 682 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 EEF1DP3Q658K8 133 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 SHQ1Q6PI26 577 aaKnown RBP12.65□□□□□ -0.38
PRPF4-201ENST00000374198 TMEM207Q6UWW9 146 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 TRIM48Q8IWZ4 208 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 RDH10Q8IZV5 341 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 CYP4Z2PQ8N1L4 340 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 PROKR1Q8TCW9 393 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 NCLNQ969V3 563 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 FAM162AQ96A26 154 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 PTERQ96BW5 349 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 VAT1Q99536 393 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 CHCHD6Q9BRQ6 235 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 HDHD5Q9BXW7 423 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 SLC22A4Q9H015 551 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 ASAH2Q9NR71 780 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 TMEM39AQ9NV64 488 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 SNX7Q9UNH6 387 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 ANKRD12Q6UB98 2062 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 SYNJ2BP-COX16A0A087WUM0 186 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 A0A0B4J293 547 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 A0A1B0GTL3 188 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 E5RI56 91 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 PLD2O14939 933 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 PSMD3O43242 534 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 TLL1O43897 1013 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 SCNN1AP37088 669 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 DAPP51397 102 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 PRKG2Q13237 762 aa12.65□□□□□ -0.38
PRPF4-201ENST00000374198 BAATQ14032 418 aaPredicted RBP12.65□□□□□ -0.38
PRPF4-201ENST00000374198 MFSD13AQ14CX5 517 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms