RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SOWAHAQ2M3V2 549 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 SLC8B1Q6J4K2 584 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 QSOX2Q6ZRP7 698 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 USP30Q70CQ3 517 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.08□□□□□ -0.16
TRAF1-201ENST00000373887 C7orf57Q8NEG2 295 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 PIGXQ8TBF5 258 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 TRIM43Q96BQ3 446 aaPredicted RBP14.08□□□□□ -0.16
TRAF1-201ENST00000373887 ARMC5Q96C12 935 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 B3GNT4Q9C0J1 378 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 OR2AG1Q9H205 316 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 RNF121Q9H920 327 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 CDH7Q9ULB5 785 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 ARL5AQ9Y689 179 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 GRIN2DO15399 1336 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 ELOVL7A1L3X0 281 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 PTGS2P35354 604 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 KIR3DL1P43629 444 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 SCN1BQ07699 218 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 EFR3AQ14156 821 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 ZNF460Q14592 562 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 NOMO1Q15155 1222 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 RAB30Q15771 203 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 CRELD2Q6UXH1 353 aaPredicted RBP14.08□□□□□ -0.16
TRAF1-201ENST00000373887 SERPINA9Q86WD7 417 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 FOXRED2Q8IWF2 684 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 LRTOMTQ8WZ04 291 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 HIST1H2AAQ96QV6 131 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 RNF225M0QZC1 329 aaPredicted RBP14.08□□□□□ -0.16
TRAF1-201ENST00000373887 INMTO95050 263 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 CYB5AP00167 134 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 BPGMP07738 259 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 TNFRSF8P28908 595 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 DAOAP59103 153 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 PRAMEF17Q5VTA0 474 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 KCTD5Q9NXV2 234 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 FKBPLQ9UIM3 349 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 NOBOXO60393 691 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 GOT2P00505 430 aaKnown RBP14.08□□□□□ -0.16
TRAF1-201ENST00000373887 DDX6P26196 483 aaKnown RBP eCLIP14.08□□□□□ -0.16
TRAF1-201ENST00000373887 KLF10Q13118 480 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 MSANTD2Q6P1R3 559 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 PLD5Q8N7P1 536 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 OR2L8Q8NGY9 312 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 C12orf42Q96LP6 360 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 KXD1Q9BQD3 176 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 NFAT5O94916 1531 aa14.08□□□□□ -0.16
TRAF1-201ENST00000373887 SLC33A1O00400 549 aaPredicted RBP14.07□□□□□ -0.16
TRAF1-201ENST00000373887 FGF18O76093 207 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 NDST3O95803 873 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 ADH5P11766 374 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 GNSP15586 552 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 ATF6P18850 670 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 CSTF1Q05048 431 aaKnown RBP14.07□□□□□ -0.16
TRAF1-201ENST00000373887 LIX1Q8N485 282 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 LPGAT1Q92604 370 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 ZNF350Q9GZX5 532 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 TMEM168Q9H0V1 697 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 C12orf65Q9H3J6 166 aaKnown RBP14.07□□□□□ -0.16
TRAF1-201ENST00000373887 NR2E1Q9Y466 385 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 BPNT1O95861 308 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 IFNW1P05000 195 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 PGDP52209 483 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 POTEHQ6S545 545 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 LRRC70Q7Z2Q7 622 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 LAPTM4BQ86VI4 370 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 SLC22A15Q8IZD6 547 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 RASGEF1AQ8N9B8 481 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 OR2AJ1Q8NGZ0 328 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 GBA3Q9H227 469 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 MOCS1Q9NZB8 636 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 MTRRQ9UBK8 725 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 TMEM5Q9Y2B1 443 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 TM7SF2O76062 418 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 PRLP01236 227 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 ANXA4P09525 319 aaPredicted RBP14.07□□□□□ -0.16
TRAF1-201ENST00000373887 CRTC2Q53ET0 693 aaPredicted RBP14.07□□□□□ -0.16
TRAF1-201ENST00000373887 P2RY8Q86VZ1 359 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 GPALPP1Q8IXQ4 340 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 KCT2Q8NC54 265 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 C12orf66Q96MD2 445 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 TCF7L1Q9HCS4 588 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 COMMD3Q9UBI1 195 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 LMO7Q8WWI1 1683 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 CLUHO75153 1309 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 PRMT5O14744 637 aaPredicted RBP14.07□□□□□ -0.16
TRAF1-201ENST00000373887 CCNB2O95067 398 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 STATHP02808 62 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 F7P08709 466 aaPredicted RBP14.07□□□□□ -0.16
TRAF1-201ENST00000373887 ZNF823P16415 610 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 ZNF8P17098 575 aaPredicted RBP14.07□□□□□ -0.16
TRAF1-201ENST00000373887 GDI2P50395 445 aaKnown RBP14.07□□□□□ -0.16
TRAF1-201ENST00000373887 PPM1JQ5JR12 505 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 IL23RQ5VWK5 629 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 TMCO2Q7Z6W1 182 aaPredicted RBP14.07□□□□□ -0.16
TRAF1-201ENST00000373887 NAXEQ8NCW5 288 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 TIFAQ96CG3 184 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 ERMAPQ96PL5 475 aaPredicted RBP14.07□□□□□ -0.16
TRAF1-201ENST00000373887 HBEGFQ99075 208 aa14.07□□□□□ -0.16
TRAF1-201ENST00000373887 SRMSQ9H3Y6 488 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms