RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 MCEEQ96PE7 176 aa11.74□□□□□ -0.53
HDAC8-204ENST00000373560 TRIM51Q9BSJ1 452 aa11.74□□□□□ -0.53
HDAC8-204ENST00000373560 VPS16Q9H269 839 aa11.74□□□□□ -0.53
HDAC8-204ENST00000373560 TXLNGQ9NUQ3 528 aa11.74□□□□□ -0.53
HDAC8-204ENST00000373560 COQ3Q9NZJ6 369 aa11.74□□□□□ -0.53
HDAC8-204ENST00000373560 FAM8A1Q9UBU6 413 aa11.74□□□□□ -0.53
HDAC8-204ENST00000373560 HIVEP2P31629 2446 aa11.74□□□□□ -0.53
HDAC8-204ENST00000373560 DAPK3O43293 454 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 POP7O75817 140 aaKnown RBP11.73□□□□□ -0.53
HDAC8-204ENST00000373560 HTR7P34969 479 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 ZNF143P52747 638 aaPredicted RBP11.73□□□□□ -0.53
HDAC8-204ENST00000373560 NIPAL4Q0D2K0 466 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 CBLBQ13191 982 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 ANKRD20A8PQ5CZ79 823 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 PPP6R3Q5H9R7 873 aaPredicted RBP11.73□□□□□ -0.53
HDAC8-204ENST00000373560 RALGPS1Q5JS13 557 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 TRIM46Q7Z4K8 759 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 RAVER1Q8IY67 606 aaKnown RBP11.73□□□□□ -0.53
HDAC8-204ENST00000373560 NDUFAF2Q8N183 169 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 LILRA3Q8N6C8 439 aaPredicted RBP11.73□□□□□ -0.53
HDAC8-204ENST00000373560 METTL27Q8N6F8 245 aaPredicted RBP11.73□□□□□ -0.53
HDAC8-204ENST00000373560 BEND7Q8N7W2 519 aaPredicted RBP11.73□□□□□ -0.53
HDAC8-204ENST00000373560 RASGEF1AQ8N9B8 481 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 C19orf47Q8N9M1 422 aaKnown RBP11.73□□□□□ -0.53
HDAC8-204ENST00000373560 LILRB4Q8NHJ6 448 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 HDAC10Q969S8 669 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 SPATA32Q96LK8 384 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 GSDMAQ96QA5 445 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 PCDHB18PQ96TA0 734 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 SELENOOQ9BVL4 669 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 RASSF1Q9NS23 344 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 CWC15Q9P013 229 aaKnown RBP11.73□□□□□ -0.53
HDAC8-204ENST00000373560 CFAP45Q9UL16 551 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 SHOC2Q9UQ13 582 aa11.73□□□□□ -0.53
HDAC8-204ENST00000373560 MRPS2Q9Y399 296 aaKnown RBP11.73□□□□□ -0.53
HDAC8-204ENST00000373560 OR5H15A6NDH6 313 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 H7C1Q1 480 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 SMAD7O15105 426 aaKnown RBP11.72□□□□□ -0.53
HDAC8-204ENST00000373560 KLK8O60259 260 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 PMPCBO75439 489 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 ZRANB2O95218 330 aaKnown RBP eCLIP11.72□□□□□ -0.53
HDAC8-204ENST00000373560 MT-CYBP00156 380 aaPredicted RBP11.72□□□□□ -0.53
HDAC8-204ENST00000373560 PYGMP11217 842 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 COX6A1P12074 109 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 BPIFB4P59827 614 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 DCDC1P59894 354 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 ITKQ08881 620 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 TMEM115Q12893 351 aaPredicted RBP11.72□□□□□ -0.53
HDAC8-204ENST00000373560 PRKAA1Q13131 559 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 MARC1Q5VT66 337 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 OVCH1Q7RTY7 1134 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 AMZ2Q86W34 360 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 KBTBD2Q8IY47 623 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 PRSS58Q8IYP2 241 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 VWA5B2Q8N398 1253 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 ARRDC2Q8TBH0 407 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 FKBP10Q96AY3 582 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 NACC2Q96BF6 587 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 FRMD6Q96NE9 622 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 ZSCAN5AQ9BUG6 496 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 XKR8Q9H6D3 395 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 PCDH9Q9HC56 1237 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 IL17CQ9P0M4 197 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 PCSK1NQ9UHG2 260 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 MAN1B1Q9UKM7 699 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 DNPEPQ9ULA0 475 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 AP1M2Q9Y6Q5 423 aa11.72□□□□□ -0.53
HDAC8-204ENST00000373560 OR2AG2A6NM03 316 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 USP1O94782 785 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 CD63P08962 238 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 ITGAMP11215 1152 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 BMP2P12643 396 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 VCLP18206 1134 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 AIF1P55008 147 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 GSCP56915 257 aaPredicted RBP11.71□□□□□ -0.53
HDAC8-204ENST00000373560 ALDH6A1Q02252 535 aaKnown RBP11.71□□□□□ -0.53
HDAC8-204ENST00000373560 ATP13A5Q4VNC0 1218 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 ZNF766Q5HY98 468 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 RNFT1Q5M7Z0 435 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 ATL3Q6DD88 541 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 NEK10Q6ZWH5 1172 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 CAMKMTQ7Z624 323 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 TMTC1Q8IUR5 882 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 TEX26Q8N6G2 289 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 CCDC110Q8TBZ0 833 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 SIGLEC12Q96PQ1 595 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 WDR54Q9H977 334 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 MRM3Q9HC36 420 aaKnown RBP11.71□□□□□ -0.53
HDAC8-204ENST00000373560 TRPS1Q9UHF7 1281 aa11.71□□□□□ -0.53
HDAC8-204ENST00000373560 PHF3Q92576 2039 aaKnown RBP11.7□□□□□ -0.54
HDAC8-204ENST00000373560 RGSL1A5PLK6 1076 aa11.7□□□□□ -0.54
HDAC8-204ENST00000373560 MED26O95402 600 aa11.7□□□□□ -0.54
HDAC8-204ENST00000373560 GNA14O95837 355 aa11.7□□□□□ -0.54
HDAC8-204ENST00000373560 TSPAN12O95859 305 aa11.7□□□□□ -0.54
HDAC8-204ENST00000373560 RAF1P04049 648 aa11.7□□□□□ -0.54
HDAC8-204ENST00000373560 ACPPP15309 386 aa11.7□□□□□ -0.54
HDAC8-204ENST00000373560 ALAS2P22557 587 aa11.7□□□□□ -0.54
HDAC8-204ENST00000373560 AMPD1P23109 780 aa11.7□□□□□ -0.54
HDAC8-204ENST00000373560 CHRNB4P30926 498 aa11.7□□□□□ -0.54
HDAC8-204ENST00000373560 PTGER1P34995 402 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms