RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 NCSTNQ92542 709 aa17.84■□□□□ 0.45
PBX3-205ENST00000373492 ZNF578Q96N58 590 aaPredicted RBP17.84■□□□□ 0.45
PBX3-205ENST00000373492 SLC30A3Q99726 388 aa17.84■□□□□ 0.45
PBX3-205ENST00000373492 FUT8Q9BYC5 575 aa17.84■□□□□ 0.45
PBX3-205ENST00000373492 RDH14Q9HBH5 336 aa17.84■□□□□ 0.45
PBX3-205ENST00000373492 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.84■□□□□ 0.45
PBX3-205ENST00000373492 TSR3Q9UJK0 312 aaKnown RBP17.84■□□□□ 0.45
PBX3-205ENST00000373492 TDRKHQ9Y2W6 561 aaKnown RBP17.84■□□□□ 0.45
PBX3-205ENST00000373492 IKBKGQ9Y6K9 419 aa17.84■□□□□ 0.45
PBX3-205ENST00000373492 V9GYY5 206 aaPredicted RBP17.84■□□□□ 0.45
PBX3-205ENST00000373492 ADAMTS20P59510 1910 aa17.84■□□□□ 0.45
PBX3-205ENST00000373492 A0A1W2PNU3 283 aaPredicted RBP17.83■□□□□ 0.44
PBX3-205ENST00000373492 MPC1LP0DKB6 136 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 MYBL2P10244 700 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 TYRP1P17643 537 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 RBMS1P29558 406 aaKnown RBP17.83■□□□□ 0.44
PBX3-205ENST00000373492 CCNFP41002 786 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 ERVPABLB-1P60509 514 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 POU4F1Q01851 419 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 TRA2AQ13595 282 aaKnown RBP eCLIP17.83■□□□□ 0.44
PBX3-205ENST00000373492 EFTUD2Q15029 972 aaKnown RBP eCLIP17.83■□□□□ 0.44
PBX3-205ENST00000373492 ERCC6LQ2NKX8 1250 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 TBC1D25Q3MII6 688 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 TMEM71Q6P5X7 295 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 WDR74Q6RFH5 385 aaPredicted RBP17.83■□□□□ 0.44
PBX3-205ENST00000373492 DCUN1D3Q8IWE4 304 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 CPNE9Q8IYJ1 553 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 OR4D9Q8NGE8 314 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 LCN9Q8WX39 176 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 TSPAN17Q96FV3 270 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 PRR11Q96HE9 360 aaPredicted RBP17.83■□□□□ 0.44
PBX3-205ENST00000373492 SLC46A1Q96NT5 459 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 NUDT22Q9BRQ3 303 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 MCMBPQ9BTE3 642 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 TFB2MQ9H5Q4 396 aaKnown RBP17.83■□□□□ 0.44
PBX3-205ENST00000373492 DMXL2Q8TDJ6 3036 aa17.83■□□□□ 0.44
PBX3-205ENST00000373492 PLD2O14939 933 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 MATN4O95460 622 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 CATP04040 527 aaKnown RBP17.82■□□□□ 0.44
PBX3-205ENST00000373492 ABHD2P08910 425 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 LIMK2P53671 638 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 IL2P60568 153 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 VSNL1P62760 191 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 TIAL1Q01085 375 aaKnown RBP eCLIP17.82■□□□□ 0.44
PBX3-205ENST00000373492 UAP1Q16222 522 aaPredicted RBP17.82■□□□□ 0.44
PBX3-205ENST00000373492 PHF19Q5T6S3 580 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 ARMC6Q6NXE6 501 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 WDR93Q6P2C0 686 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 PAQR3Q6TCH7 311 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 ZNF574Q6ZN55 896 aaPredicted RBP17.82■□□□□ 0.44
PBX3-205ENST00000373492 RAB11FIP2Q7L804 512 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 OOSP2Q86WS3 158 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 PLXDC1Q8IUK5 500 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 MYO1HQ8N1T3 1032 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 FBXO39Q8N4B4 442 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 OR52E1Q8NGJ3 308 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 SNIP1Q8TAD8 396 aaKnown RBP17.82■□□□□ 0.44
PBX3-205ENST00000373492 JPH3Q8WXH2 748 aaPredicted RBP17.82■□□□□ 0.44
PBX3-205ENST00000373492 FGF11Q92914 225 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 MRRFQ96E11 262 aaKnown RBP17.82■□□□□ 0.44
PBX3-205ENST00000373492 GPR22Q99680 433 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 OLFM1Q99784 485 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 SEMA6CQ9H3T2 930 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 SRMSQ9H3Y6 488 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 SYTL2Q9HCH5 934 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 THSD1Q9NS62 852 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 AKAP7Q9P0M2 348 aaPredicted RBP17.82■□□□□ 0.44
PBX3-205ENST00000373492 SLC39A10Q9ULF5 831 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 RAXQ9Y2V3 346 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 MTO1Q9Y2Z2 717 aaKnown RBP17.82■□□□□ 0.44
PBX3-205ENST00000373492 NFS1Q9Y697 457 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 HEATR5BQ9P2D3 2071 aa17.82■□□□□ 0.44
PBX3-205ENST00000373492 ANKRD11Q6UB99 2663 aaPredicted RBP17.82■□□□□ 0.44
PBX3-205ENST00000373492 IGHV5-10-1A0A0J9YXX1 117 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 HGSO14964 777 aaPredicted RBP17.81■□□□□ 0.44
PBX3-205ENST00000373492 RIPK2O43353 540 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 INHBAP08476 426 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 HOXB3P14651 431 aaPredicted RBP17.81■□□□□ 0.44
PBX3-205ENST00000373492 CSF2RBP32927 897 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 SHMT2P34897 504 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 CAPZBP47756 277 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 CFHR1Q03591 330 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 PRKAA1Q13131 559 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 USP10Q14694 798 aaKnown RBP17.81■□□□□ 0.44
PBX3-205ENST00000373492 UBAP2Q5T6F2 1119 aaKnown RBP17.81■□□□□ 0.44
PBX3-205ENST00000373492 RAB42Q8N4Z0 105 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 OR4E2Q8NGC2 313 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 UHMK1Q8TAS1 419 aaKnown RBP17.81■□□□□ 0.44
PBX3-205ENST00000373492 EEF1AKMT1Q8WVE0 214 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 RSC1A1Q92681 617 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 RAD51AP1Q96B01 352 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 CMKLR1Q99788 373 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 TXLNGYQ9BZA5 131 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 POPDC3Q9HBV1 291 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 ASCL3Q9NQ33 180 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 PDP2Q9P2J9 529 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 RUVBL2Q9Y230 463 aaKnown RBP17.81■□□□□ 0.44
PBX3-205ENST00000373492 LOXL2Q9Y4K0 774 aa17.81■□□□□ 0.44
PBX3-205ENST00000373492 URB1O60287 2271 aaKnown RBP17.81■□□□□ 0.44
PBX3-205ENST00000373492 CACNA1BQ00975 2339 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms