RNA–Protein interactions for RNA: ENST00000368206.5

HDGF-202, Transcript of heparin binding growth factor, humanhuman

TSL 5 BASIC

Gene HDGF, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-202ENST00000368206 TPSAB1Q15661 275 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 ATP1A1-AS1Q5TC04 95 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 MRNIPQ6NTE8 343 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 CASC4Q6P4E1 433 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 SPESP1Q6UW49 350 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 ATG14Q6ZNE5 492 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 LDB1Q86U70 411 aaPredicted RBP12.74□□□□□ -0.37
HDGF-202ENST00000368206 LRRC6Q86X45 466 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 SLC22A15Q8IZD6 547 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 MPP5Q8N3R9 675 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 PRELID2Q8N945 189 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 C9orf43Q8TAL5 461 aaPredicted RBP12.74□□□□□ -0.37
HDGF-202ENST00000368206 SKA2Q8WVK7 121 aaPredicted RBP12.74□□□□□ -0.37
HDGF-202ENST00000368206 TCTN2Q96GX1 697 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 AP1M1Q9BXS5 423 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 PITPNM3Q9BZ71 974 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 GNPTGQ9UJJ9 305 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 ICKQ9UPZ9 632 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 MRFAP1Q9Y605 127 aa12.74□□□□□ -0.37
HDGF-202ENST00000368206 SPTA1P02549 2419 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 MAGEB16A2A368 324 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 IQCF5A8MTL0 148 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 E7EQ34 232 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 MKRN2OSH3BPM6 223 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 MEN1O00255 615 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 CHRM5P08912 532 aaPredicted RBP12.73□□□□□ -0.37
HDGF-202ENST00000368206 PVRP15151 417 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 UGT2B7P16662 529 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 AGXTP21549 392 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 NMBRP28336 390 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 PTPN4P29074 926 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 ITGA1P56199 1179 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 SEMA3AQ14563 771 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 OTOAQ7RTW8 1153 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 KRT222Q8N1A0 295 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 RAB42Q8N4Z0 105 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 OR1L3Q8NH93 324 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 SLC22A18Q96BI1 424 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 FOPNLQ96NB1 174 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 LRFN5Q96NI6 719 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 NRTNQ99748 197 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 KIFC1Q9BW19 673 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 ACTL8Q9H568 366 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 ACTR5Q9H9F9 607 aaPredicted RBP12.73□□□□□ -0.37
HDGF-202ENST00000368206 AKIRIN1Q9H9L7 192 aaPredicted RBP12.73□□□□□ -0.37
HDGF-202ENST00000368206 MRM3Q9HC36 420 aaKnown RBP12.73□□□□□ -0.37
HDGF-202ENST00000368206 ZNF71Q9NQZ8 489 aaPredicted RBP12.73□□□□□ -0.37
HDGF-202ENST00000368206 TREX1Q9NSU2 369 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 IRAK4Q9NWZ3 460 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 SAMD15Q9P1V8 674 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 MARCH4Q9P2E8 410 aaPredicted RBP12.73□□□□□ -0.37
HDGF-202ENST00000368206 SLC39A10Q9ULF5 831 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 KCNMB2Q9Y691 235 aa12.73□□□□□ -0.37
HDGF-202ENST00000368206 ZNF462Q96JM2 2506 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 A0A0J9YY10 115 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 TERTO14746 1132 aaKnown RBP12.72□□□□□ -0.37
HDGF-202ENST00000368206 GPC4O75487 556 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 MSL3P1P0C860 447 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 AOAHP28039 575 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 EIF3BP55884 814 aaKnown RBP12.72□□□□□ -0.37
HDGF-202ENST00000368206 NFKB2Q00653 900 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 GPS2Q13227 327 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 KIR2DS3Q14952 304 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 RNF187Q5TA31 235 aaPredicted RBP12.72□□□□□ -0.37
HDGF-202ENST00000368206 ARMC3Q5W041 872 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 CES3Q6UWW8 571 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 UNC5DQ6UXZ4 953 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 SYVN1Q86TM6 617 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 PTRH1Q86Y79 214 aaKnown RBP12.72□□□□□ -0.37
HDGF-202ENST00000368206 RASGEF1CQ8N431 466 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 C19orf47Q8N9M1 422 aaKnown RBP12.72□□□□□ -0.37
HDGF-202ENST00000368206 MAGEC3Q8TD91 643 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 THAP4Q8WY91 577 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 ANP32BQ92688 251 aaKnown RBP12.72□□□□□ -0.37
HDGF-202ENST00000368206 MFSD3Q96ES6 412 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 ABHD17AQ96GS6 310 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 MS4A14Q96JA4 679 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 OR2A14Q96R47 310 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 TCF12Q99081 682 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 CHST8Q9H2A9 424 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 GRPEL1Q9HAV7 217 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 SYBUQ9NX95 663 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.72□□□□□ -0.37
HDGF-202ENST00000368206 PLAGL1Q9UM63 463 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 SOX13Q9UN79 622 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 MAN2B2Q9Y2E5 1009 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 AP1M2Q9Y6Q5 423 aa12.72□□□□□ -0.37
HDGF-202ENST00000368206 SPTBP11277 2137 aa12.71□□□□□ -0.37
HDGF-202ENST00000368206 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.71□□□□□ -0.37
HDGF-202ENST00000368206 GOLGA6L10A0A0M3HER8 536 aa12.71□□□□□ -0.37
HDGF-202ENST00000368206 SDR42E2A6NKP2 422 aa12.71□□□□□ -0.37
HDGF-202ENST00000368206 H3BMM5 538 aa12.71□□□□□ -0.37
HDGF-202ENST00000368206 PGRMC1O00264 195 aaKnown RBP12.71□□□□□ -0.37
HDGF-202ENST00000368206 ZNF749O43361 778 aa12.71□□□□□ -0.37
HDGF-202ENST00000368206 SUV39H1O43463 412 aa12.71□□□□□ -0.37
HDGF-202ENST00000368206 KIF5CO60282 957 aa12.71□□□□□ -0.37
HDGF-202ENST00000368206 OR2B3O76000 313 aa12.71□□□□□ -0.37
HDGF-202ENST00000368206 SLCO2B1O94956 709 aa12.71□□□□□ -0.37
HDGF-202ENST00000368206 RAB40ALP0C0E4 278 aa12.71□□□□□ -0.37
HDGF-202ENST00000368206 CHRM3P20309 590 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms