RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 DERL2Q9GZP9 239 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 MUC3BQ9H195 1237 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 ALG9Q9H6U8 611 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 MID1IP1Q9NPA3 183 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 POLR3BQ9NW08 1133 aaPredicted RBP11.32□□□□□ -0.6
USF1-201ENST00000368019 POLG2Q9UHN1 485 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 CFAP47Q6ZTR5 3102 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 CEP295Q9C0D2 2601 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 FRYQ5TBA9 3013 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 ZFC3H1O60293 1989 aaKnown RBP11.31□□□□□ -0.6
USF1-201ENST00000368019 THADAQ6YHU6 1953 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 DOCK4Q8N1I0 1966 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 LOC285095A0A1B0GVY8 99 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 SYCE1LA8MT33 242 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 AURKAO14965 403 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 INPP4BO15327 924 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 ATG13O75143 517 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 PMPCBO75439 489 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 EPN2O95208 641 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 MLYCDO95822 493 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 PEX11BO96011 259 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 CHEK2O96017 543 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 EGFP01133 1207 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 NTRK1P04629 796 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 CYBBP04839 570 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 ZNF806P0C7X5 589 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 UROSP10746 265 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 THRBP10828 461 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 SLC2A3P11169 496 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 MTHFD2P13995 350 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 HGFP14210 728 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 PCSK2P16519 638 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 IL1RNP18510 177 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 NELFEP18615 380 aaKnown RBP11.31□□□□□ -0.6
USF1-201ENST00000368019 ITIH1P19827 911 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 HLA-DPA1P20036 260 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 CDH3P22223 829 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 PSMA3P25788 255 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 OXTRP30559 389 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 GRIK1P39086 918 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 PXNP49023 591 aaPredicted RBP11.31□□□□□ -0.6
USF1-201ENST00000368019 BMXP51813 675 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 RPS3AP61247 264 aaKnown RBP11.31□□□□□ -0.6
USF1-201ENST00000368019 TSPY1Q01534 308 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 PDGFRLQ15198 375 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 MAPRE1Q15691 268 aaKnown RBP11.31□□□□□ -0.6
USF1-201ENST00000368019 DDR2Q16832 855 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 SMU1Q2TAY7 513 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 PLA2G2CQ5R387 149 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 SDHAF4Q5VUM1 108 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 NANOGP8Q6NSW7 305 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 MRNIPQ6NTE8 343 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 FAM171BQ6P995 826 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 C16orf87Q6PH81 154 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 TMEM207Q6UWW9 146 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 RNF165Q6ZSG1 346 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 HID1Q8IV36 788 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 SPATA6LQ8N4H0 392 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 PIK3C3Q8NEB9 887 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 STAG3L4Q8TBR4 150 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 MRPS31Q92665 395 aaKnown RBP11.31□□□□□ -0.6
USF1-201ENST00000368019 TANKQ92844 425 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 PTERQ96BW5 349 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 TUBGCP3Q96CW5 907 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 PHF21BQ96EK2 531 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 VMP1Q96GC9 406 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 FBXL20Q96IG2 436 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 ZC3H10Q96K80 434 aaKnown RBP11.31□□□□□ -0.6
USF1-201ENST00000368019 NSMCE2Q96MF7 247 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 ZNF599Q96NL3 588 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 SLC22A12Q96S37 553 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 PSD2Q9BQI7 771 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 AARSD1Q9BTE6 412 aaKnown RBP11.31□□□□□ -0.6
USF1-201ENST00000368019 OSBPL10Q9BXB5 764 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 ATAD3AQ9NVI7 634 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 TMED5Q9Y3A6 229 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 SH3BP1Q9Y3L3 701 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 PCDHGB1Q9Y5G3 927 aa11.31□□□□□ -0.6
USF1-201ENST00000368019 CCDC154A6NI56 674 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 AXIN1O15169 862 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 PAGE1O75459 146 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 RPP40O75818 363 aaKnown RBP11.3□□□□□ -0.6
USF1-201ENST00000368019 FGF1P05230 155 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 UGT2B4P06133 528 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 RAP2AP10114 183 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 RHOQP17081 205 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 DRD1P21728 446 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 GJA4P35212 333 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 ZFP36L2P47974 494 aaKnown RBP11.3□□□□□ -0.6
USF1-201ENST00000368019 PLK1P53350 603 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 PGGT1BP53609 377 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 ARSFP54793 590 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 CDKN2DP55273 166 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 ERVK-8P63133 956 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 CLCQ05315 142 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 MTA1Q13330 715 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 SF3A2Q15428 464 aaKnown RBP11.3□□□□□ -0.6
USF1-201ENST00000368019 ZNF77Q15935 545 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 RFX4Q33E94 735 aa11.3□□□□□ -0.6
USF1-201ENST00000368019 VPS26BQ4G0F5 336 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms