RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 SLC22A15Q8IZD6 547 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 FSTL5Q8N475 847 aaPredicted RBP6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 SPATA6LQ8N4H0 392 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 ARMC2Q8NEN0 867 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 RHEBL1Q8TAI7 183 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 STAG3L4Q8TBR4 150 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 RDH11Q8TC12 318 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 EEF1AKMT1Q8WVE0 214 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 ANKRD49Q8WVL7 239 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 DYDC1Q8WWB3 177 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 EXT2Q93063 718 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 TSACCQ96A04 125 aaPredicted RBP6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 KIAA1191Q96A73 305 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 COL26A1Q96A83 441 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 PDLIM5Q96HC4 596 aaKnown RBP6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 NAF1Q96HR8 494 aaKnown RBP6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 PAIP2Q9BPZ3 127 aaKnown RBP6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 GSDMCQ9BYG8 508 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 UNKQ9C0B0 810 aaKnown RBP6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 ALG9Q9H6U8 611 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 INTS9Q9NV88 658 aaKnown RBP6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 TRNAU1APQ9NX07 287 aaKnown RBP6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 DNAJC28Q9NX36 388 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 FAM53CQ9NYF3 392 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 APOBEC3BQ9UH17 382 aaKnown RBP6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 RNF112Q9ULX5 631 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 RUVBL2Q9Y230 463 aaKnown RBP6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 APOBEC2Q9Y235 224 aaKnown RBP6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 KCNK6Q9Y257 313 aa6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 PCYT1BQ9Y5K3 369 aaPredicted RBP6.62□□□□□ -1.35
RNU1-55P-201ENST00000365510 SMG1Q96Q15 3661 aaKnown RBP6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 SUPT3HB4E1H0 165 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 SLC16A5O15375 505 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 SNX2O60749 519 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 SMIM24O75264 130 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 SUPT3HO75486 399 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 GPC4O75487 556 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 DKK1O94907 266 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 CATP04040 527 aaKnown RBP6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 PROCP04070 461 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 CSF2P04141 144 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 MYL2P10916 166 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 NEFHP12036 1026 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 CTSEP14091 401 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 NME1P15531 152 aaKnown RBP6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 CHN1P15882 459 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 JUNDP17535 347 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 CYP2A7P20853 494 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 IDSP22304 550 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 GMPRP36959 345 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 ACTR1BP42025 376 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 HALP42357 657 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 SERPINB4P48594 390 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 CLCNKAP51800 687 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 ACTR1AP61163 376 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 HNRNPKP61978 463 aaKnown RBP eCLIP6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 ASPHQ12797 758 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 EIF2B5Q13144 721 aaKnown RBP6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 TARDBPQ13148 414 aaKnown RBP eCLIP6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 SLC14A1Q13336 389 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 OR4D1Q15615 310 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 METRNLQ641Q3 311 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 C16orf46Q6P387 395 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 SLC30A9Q6PML9 568 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 PCSK4Q6UW60 755 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 UNC5DQ6UXZ4 953 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 ZYG11AQ6WRX3 759 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 FAM83HQ6ZRV2 1179 aaPredicted RBP6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 GLRX5Q86SX6 157 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 ISCA2Q86U28 154 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 GPSM1Q86YR5 675 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 VRK3Q8IV63 474 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 SLC22A9Q8IVM8 553 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 LILRA3Q8N6C8 439 aaPredicted RBP6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 EID2Q8N6I1 236 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 MAGEC3Q8TD91 643 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 PTERQ96BW5 349 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 CCDC126Q96EE4 140 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 GPR78Q96P69 363 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 TRIM54Q9BYV2 358 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 TMEM168Q9H0V1 697 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 OR52A5Q9H2C5 316 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 MLXIPLQ9NP71 852 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 ZNF358Q9NW07 568 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 NUDT4Q9NZJ9 180 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 OGFRQ9NZT2 677 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 TMEM216Q9P0N5 145 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 CPSF2Q9P2I0 782 aaKnown RBP6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 SLC17A7Q9P2U7 560 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 COPG2Q9UBF2 871 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 SPASTQ9UBP0 616 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 GULP1Q9UBP9 304 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 SLC23A2Q9UGH3 650 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 EMCNQ9ULC0 261 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 TMCO1Q9UM00 188 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 CDYLQ9Y232 598 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 OARD1Q9Y530 152 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 PTPRQQ9UMZ3 2332 aa6.61□□□□□ -1.35
RNU1-55P-201ENST00000365510 EIF4E1BA6NMX2 242 aaKnown RBP6.6□□□□□ -1.35
RNU1-55P-201ENST00000365510 CDC7O00311 574 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms