RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 ZNF561Q8N587 486 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 Q8N9L7 120 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 PPFIBP2Q8ND30 876 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 OR1L3Q8NH93 324 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 U2AF1L4Q8WU68 220 aaKnown RBP0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 NSMAFQ92636 917 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 FAM104AQ969W3 186 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 CNRIP1Q96F85 164 aaPredicted RBP0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 EGLN2Q96KS0 407 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 COG8Q96MW5 612 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 NECTIN4Q96NY8 510 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 NKX3-1Q99801 234 aaPredicted RBP0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 RANBP17Q9H2T7 1088 aaKnown RBP0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 SLA2Q9H6Q3 261 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 EPB41L5Q9HCM4 733 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 DIAPH3Q9NSV4 1193 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 TRMT1Q9NXH9 659 aaKnown RBP0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 ABI3Q9P2A4 366 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 SLC25A10Q9UBX3 287 aaPredicted RBP0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 PLEKHA6Q9Y2H5 1048 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 TENM1Q9UKZ4 2725 aa0.73□□□□□ -2.29
RNU4-11P-201ENST00000365287 POGZQ7Z3K3 1410 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 ELOVL7A1L3X0 281 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 B9A039 149 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 E9PAM4 449 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 PRDM1O75626 825 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 SEC31AO94979 1220 aaKnown RBP0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 NKX2-2O95096 273 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 FAM200BP0CF97 657 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 IL7RP16871 459 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 GIFP27352 417 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 PSMC2P35998 433 aaKnown RBP0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 CPOXP36551 454 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 ARL1P40616 181 aaPredicted RBP0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 PIP4K2AP48426 406 aaPredicted RBP0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 PAPOLAP51003 745 aaKnown RBP0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 PRELPP51888 382 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 NEK3P51956 506 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 CX3CL1P78423 397 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 DLG2Q15700 870 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 NFIL3Q16649 462 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 SLC9B1Q4ZJI4 515 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 CCDC38Q502W7 563 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 GCNT6Q5T4J0 391 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 AGAP7PQ5VUJ5 663 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 ADALQ6DHV7 355 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 IL31Q6EBC2 164 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 GSTA5Q7RTV2 222 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 GALNT5Q7Z7M9 940 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 MOGAT3Q86VF5 341 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 KRTAP13-1Q8IUC0 172 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 FTSJ3Q8IY81 847 aaKnown RBP0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 RILPL2Q969X0 211 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 APOL2Q9BQE5 337 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 UBAC1Q9BSL1 405 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 CRB3Q9BUF7 120 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 ARRDC1-AS1Q9H2J1 176 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 MTHFD2LQ9H903 347 aaPredicted RBP0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 PPP1R14DQ9NXH3 145 aa0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 SEC23IPQ9Y6Y8 1000 aaKnown RBP0.72□□□□□ -2.29
RNU4-11P-201ENST00000365287 ARHGEF40Q8TER5 1519 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 C17orf51A8MQB3 221 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 K7EQD1 137 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 SNAP23O00161 211 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 EPHB6O15197 1021 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 SMAD9O15198 467 aaKnown RBP0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 MAGEB4O15481 346 aaPredicted RBP0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 LRP3O75074 770 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 CDK2AP2O75956 126 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 ASNSP08243 561 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 SETSIPP0DME0 302 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 PDX1P52945 283 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 TAS2R40P59535 323 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 RPS3AP61247 264 aaKnown RBP0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 ZNF177Q13360 481 aaPredicted RBP0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 TDGQ13569 410 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 EFR3AQ14156 821 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 MEP1AQ16819 746 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 SOWAHCQ53LP3 525 aaPredicted RBP0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 SLC25A53Q5H9E4 307 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 NAA35Q5VZE5 725 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 Q6P435 159 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 KSR2Q6VAB6 950 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 LRRC8DQ7L1W4 858 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 GALNT13Q8IUC8 556 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 LYPD1Q8N2G4 141 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 C9orf43Q8TAL5 461 aaPredicted RBP0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 ZCCHC10Q8TBK6 192 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 TRAPPC12Q8WVT3 735 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 PSPC1Q8WXF1 523 aaKnown RBP0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 GTF3C6Q969F1 213 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 CFAP57Q96MR6 1250 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 SLC22A12Q96S37 553 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 ELAC2Q9BQ52 826 aaKnown RBP0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 FAM167BQ9BTA0 163 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 ABHD6Q9BV23 337 aa0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 RBM24Q9BX46 236 aaKnown RBP0.71□□□□□ -2.3
RNU4-11P-201ENST00000365287 VN1R1Q9GZP7 353 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms