RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 FOXN3O00409 490 aaPredicted RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 SCAMP1O15126 338 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 CASC3O15234 703 aaKnown RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 PHGDHO43175 533 aaKnown RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 KLK10O43240 276 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 ZNF821O75541 412 aaPredicted RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 FGFR1OPO95684 399 aaKnown RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 ONECUT2O95948 504 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 ADRB3P13945 408 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 NDUFB7P17568 137 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 DRD4P21917 467 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 TGM2P21980 687 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 OR1E1P30953 314 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 GKP32189 559 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 MTIF2P46199 727 aaKnown RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 CXCR3P49682 368 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 CCNHP51946 323 aaPredicted RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 NEK3P51956 506 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 HNRNPKP61978 463 aaKnown RBP eCLIP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 RPS21P63220 83 aaKnown RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 CFHR1Q03591 330 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 CCDC15Q0P6D6 951 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 EIF2B5Q13144 721 aaKnown RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 BOP1Q14137 746 aaKnown RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 FZD2Q14332 565 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 DRAP1Q14919 205 aaPredicted RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 EXOC3L4Q17RC7 722 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 DEFB133Q30KQ1 61 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 C5orf22Q49AR2 442 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 TAF1BQ53T94 588 aaPredicted RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 C2CD6Q53TS8 623 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 C3orf38Q5JPI3 329 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 LRRC73Q5JTD7 316 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 BRMS1LQ5PSV4 323 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 TPRG1LQ5T0D9 272 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 TAF3Q5VWG9 929 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 TRNP1Q6NT89 227 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 GUSBP11Q6P575 273 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 LRRC31Q6UY01 552 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 EFL1Q7Z2Z2 1120 aaKnown RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 ABI3BPQ7Z7G0 1075 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 SETD3Q86TU7 594 aaPredicted RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 DTX2Q86UW9 622 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 RYBPQ8N488 228 aaPredicted RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 ZBTB34Q8NCN2 500 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 ZNF548Q8NEK5 533 aaPredicted RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 ZNF397Q8NF99 534 aaPredicted RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 OR6K2Q8NGY2 324 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 MAPK15Q8TD08 544 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 LMX1AQ8TE12 382 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 KCNE4Q8WWG9 221 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 PPP1R16AQ96I34 528 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 HIC2Q96JB3 615 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 FAM81BQ96LP2 452 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 ZNF578Q96N58 590 aaPredicted RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 SLC17A9Q9BYT1 436 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 TRIM54Q9BYV2 358 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 TM6SF2Q9BZW4 377 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 PDCL3Q9H2J4 239 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 ZDHHC6Q9H6R6 413 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 SYNDIG1Q9H7V2 258 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 POLR1BQ9H9Y6 1135 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 SIX2Q9NPC8 291 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 ARHGEF38Q9NXL2 777 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 IPO11Q9UI26 975 aaKnown RBP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 DNAJC12Q9UKB3 198 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 STAP1Q9ULZ2 295 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 SATB2Q9UPW6 733 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 ITM2BQ9Y287 266 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 FADS3Q9Y5Q0 445 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 RP1P56715 2156 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 PCSK5Q92824 1860 aa5.22□□□□□ -1.57
RNU4-4P-201ENST00000364588 IGLV3-10A0A075B6K4 115 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 SPTY2D1-AS1A0A0U1RR47 76 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 A0A1W2PNU3 283 aaPredicted RBP5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 ILVBLA1L0T0 632 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 IGLON5A6NGN9 336 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 PYCARD-AS1I3L0S3 204 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 PPM1DO15297 605 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 ZMPSTE24O75844 475 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 SCGB1D2O95969 90 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 CSF2P04141 144 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 GP1BAP07359 652 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 KRT10P13645 584 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 PCSK6P29122 969 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 ALDH9A1P49189 494 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 SERPINH1P50454 418 aaKnown RBP5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 DUSP3P51452 185 aaPredicted RBP5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 AGFG1P52594 562 aaKnown RBP5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 TMPRSS3P57727 454 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 SNX16P57768 344 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 ARF5P84085 180 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 GNA12Q03113 381 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 SGCGQ13326 291 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 MTA1Q13330 715 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 C1orf61Q13536 156 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 RAPGEF1Q13905 1077 aa5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 PDE1CQ14123 709 aaPredicted RBP5.21□□□□□ -1.58
RNU4-4P-201ENST00000364588 LY6DQ14210 128 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms