RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 RPL10P27635 214 aaKnown RBP20.12■□□□□ 0.81
SHISA4-201ENST00000362011 MAP4P27816 1152 aaKnown RBP20.12■□□□□ 0.81
SHISA4-201ENST00000362011 PRKAA2P54646 552 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 NFKB2Q00653 900 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 PDK4Q16654 411 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 PHKG1Q16816 387 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 LIPMQ5VYY2 423 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 CAPRIN2Q6IMN6 1127 aaKnown RBP20.12■□□□□ 0.81
SHISA4-201ENST00000362011 FBXO39Q8N4B4 442 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 CCL4L1Q8NHW4 92 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 MCOLN3Q8TDD5 553 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 GPBAR1Q8TDU6 330 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 DLG3Q92796 817 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 HIST1H2AHQ96KK5 128 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 MAGEB18Q96M61 343 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 HIST1H2AJQ99878 128 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 H2AFJQ9BTM1 129 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 CAPS2Q9BXY5 557 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 ZDHHC5Q9C0B5 715 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 TMEM74BQ9NUR3 256 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 OXSMQ9NWU1 459 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 UTP6Q9NYH9 597 aaKnown RBP20.12■□□□□ 0.81
SHISA4-201ENST00000362011 SIRPGQ9P1W8 387 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 PDE10AQ9Y233 779 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 CEP295Q9C0D2 2601 aa20.12■□□□□ 0.81
SHISA4-201ENST00000362011 PCDH15Q96QU1 1955 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 LNP1A1A4G5 178 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 ARHGEF33A8MVX0 844 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 FFAR2O15552 330 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 TRIM13O60858 407 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 IPO13O94829 963 aaKnown RBP20.11■□□□□ 0.81
SHISA4-201ENST00000362011 HOXD12P35452 270 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 HALP42357 657 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 BDKRB1P46663 353 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 RPIAP49247 311 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 CDKL1Q00532 357 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 TCEA2Q15560 299 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 TTC19Q6DKK2 380 aaPredicted RBP20.11■□□□□ 0.81
SHISA4-201ENST00000362011 SLC30A9Q6PML9 568 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 WASH2PQ6VEQ5 465 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 RABEPKQ7Z6M1 372 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 RAB44Q7Z6P3 723 aaPredicted RBP20.11■□□□□ 0.81
SHISA4-201ENST00000362011 NRROSQ86YC3 692 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 SPDYE1Q8NFV5 336 aaPredicted RBP20.11■□□□□ 0.81
SHISA4-201ENST00000362011 PPP1R14CQ8TAE6 165 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 TFGQ92734 400 aaPredicted RBP20.11■□□□□ 0.81
SHISA4-201ENST00000362011 C12orf66Q96MD2 445 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 EGFL8Q99944 293 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 WASH6PQ9NQA3 447 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 NCKIPSDQ9NZQ3 722 aa20.11■□□□□ 0.81
SHISA4-201ENST00000362011 NCF1BA6NI72 391 aaPredicted RBP20.1■□□□□ 0.81
SHISA4-201ENST00000362011 C4orf47A7E2U8 309 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 NCF1CA8MVU1 366 aaPredicted RBP20.1■□□□□ 0.81
SHISA4-201ENST00000362011 KLK8O60259 260 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 H2AFYO75367 372 aaKnown RBP20.1■□□□□ 0.81
SHISA4-201ENST00000362011 C1orf105O95561 183 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 GUCA1CO95843 209 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 RPN2P04844 631 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 FGF3P11487 239 aaPredicted RBP20.1■□□□□ 0.81
SHISA4-201ENST00000362011 NCF1P14598 390 aaPredicted RBP20.1■□□□□ 0.81
SHISA4-201ENST00000362011 BGNP21810 368 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 AP1S2P56377 157 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 DNAJB13P59910 316 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 HNRNPKP61978 463 aaKnown RBP eCLIP20.1■□□□□ 0.81
SHISA4-201ENST00000362011 CHI3L2Q15782 390 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 UAP1L1Q3KQV9 507 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 TUBB8Q3ZCM7 444 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 CDKL4Q5MAI5 379 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 ABRAXAS1Q6UWZ7 409 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 PTGR2Q8N8N7 351 aaPredicted RBP20.1■□□□□ 0.81
SHISA4-201ENST00000362011 PDPRQ8NCN5 879 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 FBXO15Q8NCQ5 510 aaPredicted RBP20.1■□□□□ 0.81
SHISA4-201ENST00000362011 RAB3IL1Q8TBN0 382 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 MAGEC3Q8TD91 643 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 LRRC8CQ8TDW0 803 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 PHF21BQ96EK2 531 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 LRRC61Q9BV99 259 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 TMEM121BQ9BXQ6 578 aaPredicted RBP20.1■□□□□ 0.81
SHISA4-201ENST00000362011 CCDC134Q9H6E4 229 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 ERVMER34-1Q9H9K5 563 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 PRDM8Q9NQV8 689 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 ARL15Q9NXU5 204 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 SPASTQ9UBP0 616 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 TBC1D29Q9UFV1 150 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 ADAM21Q9UKJ8 722 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 PCOLCE2Q9UKZ9 415 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 ASF1AQ9Y294 204 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 WDR37Q9Y2I8 494 aa20.1■□□□□ 0.81
SHISA4-201ENST00000362011 STX16-NPEPL1H3BU86 382 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 CDX4O14627 284 aaPredicted RBP20.09■□□□□ 0.81
SHISA4-201ENST00000362011 STX16O14662 325 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 ANXA5P08758 320 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 CTSKP43235 329 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 ALDH18A1P54886 795 aaKnown RBP20.09■□□□□ 0.81
SHISA4-201ENST00000362011 GNGT1P63211 74 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 C1orf61Q13536 156 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 ELOCQ15369 112 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 PFKFB4Q16877 469 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 DUOXA1Q1HG43 343 aa20.09■□□□□ 0.81
SHISA4-201ENST00000362011 PRRT3Q5FWE3 981 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms