RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 SNX6Q9UNH7 406 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 CORINQ9Y5Q5 1042 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 DOCK5Q9H7D0 1870 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 A0A1B0GTL3 188 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 IFRD1O00458 451 aaPredicted RBP13.4□□□□□ -0.26
SGMS1-202ENST00000361781 UGT2B11O75310 529 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 FABP3P05413 133 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 OTUD1Q5VV17 481 aaPredicted RBP13.4□□□□□ -0.26
SGMS1-202ENST00000361781 SPARTQ8N0X7 666 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 TRUB1Q8WWH5 349 aaKnown RBP13.4□□□□□ -0.26
SGMS1-202ENST00000361781 FOPNLQ96NB1 174 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 IL4I1Q96RQ9 567 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 CACYBPQ9HB71 228 aaKnown RBP13.4□□□□□ -0.26
SGMS1-202ENST00000361781 ZFYVE1Q9HBF4 777 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 MIEF1Q9NQG6 463 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 C14orf119Q9NWQ9 140 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 MALT1Q9UDY8 824 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 SAMD4AQ9UPU9 718 aaKnown RBP13.4□□□□□ -0.26
SGMS1-202ENST00000361781 SLC1A7O00341 560 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 SNX4O95219 450 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 VIPP01282 170 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 LCKP06239 509 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 GSTT2P0CG29 244 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 GSTT2BP0CG30 244 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 RRM2P31350 389 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 TIGD6Q17RP2 521 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 USP39Q53GS9 565 aaKnown RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 LETMD1Q6P1Q0 360 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 VTCN1Q7Z7D3 282 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 WDR36Q8NI36 951 aaKnown RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 PHF10Q8WUB8 498 aaKnown RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 DPH2Q9BQC3 489 aaPredicted RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 NUSAP1Q9BXS6 441 aaKnown RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 BEX2Q9BXY8 128 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 AASDHPPTQ9NRN7 309 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 ZIM2Q9NZV7 527 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 PCDHB7Q9Y5E2 793 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 TPD52L2O43399 206 aaKnown RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 GBAP04062 536 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 EPORP19235 508 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 OGNP20774 298 aaKnown RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 SMAD3P84022 425 aaKnown RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 SMARCB1Q12824 385 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 GANABQ14697 944 aaKnown RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 ZBTB6Q15916 424 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 RAVER1Q8IY67 606 aaKnown RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 PIANPQ8IYJ0 282 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 FAM86B1Q8N7N1 296 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 ENKURQ8TC29 256 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 ZNF599Q96NL3 588 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 SMOC2Q9H3U7 446 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 CTPS2Q9NRF8 586 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 ERGIC3Q9Y282 383 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 WBP11Q9Y2W2 641 aaKnown RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 FZD9O00144 591 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 TRBC1P01850 177 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 AKR1A1P14550 325 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 NR4A2P43354 598 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 ALDH7A1P49419 539 aaKnown RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 PRKAG1P54619 331 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 YBEYP58557 167 aaPredicted RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 PHKG1Q16816 387 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 PM20D1Q6GTS8 502 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 AGMOQ6ZNB7 445 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 SH3RF2Q8TEC5 729 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 GTF3C2Q8WUA4 911 aaPredicted RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 NELL1Q92832 810 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 FUBP1Q96AE4 644 aaKnown RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 LGALS12Q96DT0 336 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 TREX1Q9NSU2 369 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 CD300AQ9UGN4 299 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 PGAP2Q9UHJ9 254 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 DNMT3LQ9UJW3 386 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 WDR37Q9Y2I8 494 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 ARIH1Q9Y4X5 557 aaPredicted RBP13.39□□□□□ -0.27
SGMS1-202ENST00000361781 SPO11Q9Y5K1 396 aa13.39□□□□□ -0.27
SGMS1-202ENST00000361781 TPST2O60704 377 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 CORO1AP31146 461 aaKnown RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 CD97P48960 835 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 CD300CQ08708 224 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 PCBP1Q15365 356 aaKnown RBP eCLIP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 RETSATQ6NUM9 610 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 RBFAQ8N0V3 343 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 KBTBD8Q8NFY9 601 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 MYDGFQ969H8 173 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 TCF25Q9BQ70 676 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 CNPPD1Q9BV87 410 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 EHD1Q9H4M9 534 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 ABT1Q9ULW3 272 aaKnown RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 MAP4K5Q9Y4K4 846 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 OAS3Q9Y6K5 1087 aaKnown RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 COL2A1P02458 1487 aaPredicted RBP13.38□□□□□ -0.27
SGMS1-202ENST00000361781 OR2AG2A6NM03 316 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 TNFRSF11BO00300 401 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 SLC22A1O15245 554 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 CLDN9O95484 217 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 GPC1P35052 558 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 OR1E2P47887 323 aa13.38□□□□□ -0.27
SGMS1-202ENST00000361781 PGFP49763 221 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms