RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 TMEM39AQ9NV64 488 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 FBXW11Q9UKB1 542 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 ZNF451Q9Y4E5 1061 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 POLR3HQ9Y535 204 aaPredicted RBP12.46□□□□□ -0.41
VAMP1-201ENST00000361716 PNMA8CA0A1B0GUJ8 204 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 CCDC182A6NF36 153 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 I3L521 148 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 M0R129 80 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 UPK1AO00322 258 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 CDK2AP1O14519 115 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 NCAM2O15394 837 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 SOX6P35712 828 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 DCTP40126 519 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 CTSKP43235 329 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 EEFSECP57772 596 aaKnown RBP12.46□□□□□ -0.41
VAMP1-201ENST00000361716 DAOAP59103 153 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 HERVK_113P63132 956 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 BTBD16Q32M84 506 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 DCAF4L1Q3SXM0 396 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 LAIR2Q6ISS4 152 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 IL27RAQ6UWB1 636 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 ANKRD46Q86W74 232 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 STX19Q8N4C7 294 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 TTC29Q8NA56 475 aaPredicted RBP12.46□□□□□ -0.41
VAMP1-201ENST00000361716 SETD9Q8NE22 299 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 ERVK-6Q9BXR3 956 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 ABCB9Q9NP78 766 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 SDR39U1Q9NRG7 319 aaPredicted RBP12.46□□□□□ -0.41
VAMP1-201ENST00000361716 PDP1Q9P0J1 537 aaPredicted RBP12.46□□□□□ -0.41
VAMP1-201ENST00000361716 DNMT3LQ9UJW3 386 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 USP3Q9Y6I4 520 aa12.46□□□□□ -0.41
VAMP1-201ENST00000361716 COL2A1P02458 1487 aaPredicted RBP12.46□□□□□ -0.42
VAMP1-201ENST00000361716 FAM92AA1XBS5 289 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 J3KR12 359 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 EPN2O95208 641 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 SCNN1GP51170 649 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 SMARCB1Q12824 385 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 PAFAH1B3Q15102 231 aaKnown RBP12.46□□□□□ -0.42
VAMP1-201ENST00000361716 DDR2Q16832 855 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 PLEKHG6Q3KR16 790 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 GTDC1Q4AE62 458 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 Q5BKY6 102 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 PRSS36Q5K4E3 855 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 NOXA1Q86UR1 476 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 TMEM199Q8N511 208 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 GALNT6Q8NCL4 622 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 CENPIQ92674 756 aaPredicted RBP12.46□□□□□ -0.42
VAMP1-201ENST00000361716 TP53INP1Q96A56 240 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 SMIM14Q96QK8 99 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 SNX18Q96RF0 628 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 APOL4Q9BPW4 351 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 GALPQ9UBC7 116 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 RAPGEFL1Q9UHV5 662 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 FBXO10Q9UK96 956 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 ARL5AQ9Y689 179 aa12.46□□□□□ -0.42
VAMP1-201ENST00000361716 SHROOM3Q8TF72 1996 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 MEIOCA2RUB1 952 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 ASPDHA6ND91 283 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 EFCAB10A6NFE3 127 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 NDUFS3O75489 264 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 SLC2A4P14672 509 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 HOXA11P31270 313 aaPredicted RBP12.45□□□□□ -0.42
VAMP1-201ENST00000361716 RRM2P31350 389 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 SLC9A3P48764 834 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 FCGRTP55899 365 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 EFEMP1Q12805 493 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 TSNQ15631 228 aaKnown RBP12.45□□□□□ -0.42
VAMP1-201ENST00000361716 NFE2Q16621 373 aaPredicted RBP12.45□□□□□ -0.42
VAMP1-201ENST00000361716 ZMAT1Q5H9K5 638 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 MARC1Q5VT66 337 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 C8orf82Q6P1X6 216 aaPredicted RBP12.45□□□□□ -0.42
VAMP1-201ENST00000361716 SMOQ99835 787 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 EGFL8Q99944 293 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 RBPJLQ9UBG7 517 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 TULP3O75386 442 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 OR4F21O95013 312 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 GLP2RO95838 553 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 GABARAPL2P60520 117 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 SLC10A7Q0GE19 358 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 ZNF691Q5VV52 312 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 SLC44A2Q8IWA5 706 aaPredicted RBP12.45□□□□□ -0.42
VAMP1-201ENST00000361716 TMEM40Q8WWA1 233 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 KIFC1Q9BW19 673 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 ACAT2Q9BWD1 397 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 ITPAQ9BY32 194 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 FBXL12Q9NXK8 326 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 MALT1Q9UDY8 824 aa12.45□□□□□ -0.42
VAMP1-201ENST00000361716 TREHO43280 583 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 TLL1O43897 1013 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 SLC10A3P09131 477 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 G6PDP11413 515 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 SSTR4P31391 388 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 CA5AP35218 305 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 MAPK12P53778 367 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 IL18R1Q13478 541 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 ZNF235Q14590 738 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 ACOX1Q15067 660 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 BRMS1LQ5PSV4 323 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 PNCKQ6P2M8 343 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 ISCA2Q86U28 154 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms