RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 FADS3Q9Y5Q0 445 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 CLDN7O95471 211 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 CYP11A1P05108 521 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 AQP1P29972 269 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 PLA2G16P53816 162 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 NFKB2Q00653 900 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 SCAPQ12770 1279 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 SLBPQ14493 270 aaKnown RBP eCLIP13.22□□□□□ -0.29
LDB3-202ENST00000361373 SLC44A4Q53GD3 710 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 FRG2Q64ET8 278 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 SPPL2CQ8IUH8 684 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 FAM13CQ8NE31 585 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 PIH1D2Q8WWB5 315 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 CENPNQ96H22 339 aaPredicted RBP13.22□□□□□ -0.29
LDB3-202ENST00000361373 ZNF354BQ96LW1 612 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 FRG2BQ96QU4 278 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 SMURF2Q9HAU4 748 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.21□□□□□ -0.29
LDB3-202ENST00000361373 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.21□□□□□ -0.29
LDB3-202ENST00000361373 PLK4O00444 970 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 ECI2O75521 394 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 CLCNKAP51800 687 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 FOLH1Q04609 750 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 SLC13A2Q13183 592 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 IFI44LQ53G44 452 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 KLHL12Q53G59 568 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 TCEAL5Q5H9L2 206 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 LRRC66Q68CR7 880 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 MZT2BQ6NZ67 158 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 RALGPS2Q86X27 583 aaPredicted RBP13.21□□□□□ -0.29
LDB3-202ENST00000361373 GKN2Q86XP6 184 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 CPNE8Q86YQ8 564 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 ARL10Q8N8L6 244 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 ANKLE1Q8NAG6 615 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 PIGXQ8TBF5 258 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 TFGQ92734 400 aaPredicted RBP13.21□□□□□ -0.29
LDB3-202ENST00000361373 ZNF347Q96SE7 839 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 NLE1Q9NVX2 485 aaPredicted RBP13.21□□□□□ -0.29
LDB3-202ENST00000361373 CFL2Q9Y281 166 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 C4BP0C0L5 1744 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 KLF11O14901 512 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 CHST10O43529 356 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 PROZP22891 400 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 PRKCHP24723 683 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 CRISP3P54108 245 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 SEMA3AQ14563 771 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 EML3Q32P44 896 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 FAM174BQ3ZCQ3 159 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 LRRC73Q5JTD7 316 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 CROCCP3Q8IVE0 287 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 VANGL1Q8TAA9 524 aaPredicted RBP13.21□□□□□ -0.29
LDB3-202ENST00000361373 KCNN2Q9H2S1 579 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 MAGEE1Q9HCI5 957 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 MYH2Q9UKX2 1941 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 OR51F1A6NGY5 319 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 IGFBP5P24593 272 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 CAPGP40121 348 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 RAB33AQ14088 237 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 VWA5B1Q5TIE3 1220 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 NIPAL1Q6NVV3 410 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 RPTNQ6XPR3 784 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 JAZF1Q86VZ6 243 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 HPS6Q86YV9 775 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 COX18Q8N8Q8 333 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 OSER1Q9NX31 292 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 PDP1Q9P0J1 537 aaPredicted RBP13.21□□□□□ -0.29
LDB3-202ENST00000361373 ACSL5Q9ULC5 683 aa13.21□□□□□ -0.29
LDB3-202ENST00000361373 C9J4A7 227 aa13.21□□□□□ -0.3
LDB3-202ENST00000361373 CNTN5O94779 1100 aa13.21□□□□□ -0.3
LDB3-202ENST00000361373 HSPB3Q12988 150 aa13.21□□□□□ -0.3
LDB3-202ENST00000361373 TMEM44Q2T9K0 475 aa13.21□□□□□ -0.3
LDB3-202ENST00000361373 RELL1Q8IUW5 271 aa13.21□□□□□ -0.3
LDB3-202ENST00000361373 DCUN1D3Q8IWE4 304 aa13.21□□□□□ -0.3
LDB3-202ENST00000361373 TRPV1Q8NER1 839 aa13.21□□□□□ -0.3
LDB3-202ENST00000361373 PNPT1Q8TCS8 783 aaKnown RBP13.21□□□□□ -0.3
LDB3-202ENST00000361373 MPP4Q96JB8 637 aa13.21□□□□□ -0.3
LDB3-202ENST00000361373 MOCS1Q9NZB8 636 aa13.21□□□□□ -0.3
LDB3-202ENST00000361373 ZIM2Q9NZV7 527 aa13.21□□□□□ -0.3
LDB3-202ENST00000361373 ZNF840PA6NDX5 716 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 TIPRLO75663 272 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 ZNF37AP17032 561 aaPredicted RBP13.2□□□□□ -0.3
LDB3-202ENST00000361373 AGXTP21549 392 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 IL12BP29460 328 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 GRIA1P42261 906 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 DHPSP49366 369 aaPredicted RBP13.2□□□□□ -0.3
LDB3-202ENST00000361373 FITM2Q8N6M3 262 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 FAM46DQ8NEK8 389 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 KIAA1191Q96A73 305 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 P2RY13Q9BPV8 354 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 PDLIM7Q9NR12 457 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 CNOT6Q9ULM6 557 aaKnown RBP13.2□□□□□ -0.3
LDB3-202ENST00000361373 PPIEQ9UNP9 301 aaKnown RBP13.2□□□□□ -0.3
LDB3-202ENST00000361373 A0A1W2PRB8 838 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 A8MT66 165 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 HCRTO43612 131 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 AHSGP02765 367 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 CFIP05156 583 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 HOXA11P31270 313 aaPredicted RBP13.2□□□□□ -0.3
LDB3-202ENST00000361373 SOX4Q06945 474 aaPredicted RBP13.2□□□□□ -0.3
LDB3-202ENST00000361373 ZNF805Q5CZA5 627 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms