RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 TRAPPC5Q8IUR0 188 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 EFHD2Q96C19 240 aaPredicted RBP13.71□□□□□ -0.22
SMC5-201ENST00000361138 POLR2J2Q9GZM3 115 aaKnown RBP13.71□□□□□ -0.22
SMC5-201ENST00000361138 CPA4Q9UI42 421 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 POFUT2Q9Y2G5 429 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 KCNE2Q9Y6J6 123 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 STON1Q9Y6Q2 735 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 QSOX1O00391 747 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 BMP2P12643 396 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 FAUP35544 74 aaKnown RBP13.71□□□□□ -0.22
SMC5-201ENST00000361138 TBRG1Q3YBR2 411 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 PAQR3Q6TCH7 311 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 CERS6Q6ZMG9 384 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 CCDC28AQ8IWP9 274 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 FAM20CQ8IXL6 584 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 ZNF655Q8N720 491 aaPredicted RBP13.71□□□□□ -0.22
SMC5-201ENST00000361138 SLC35F5Q8WV83 523 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 PSMG2Q969U7 264 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 SIPA1Q96FS4 1042 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 FIZ1Q96SL8 496 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 ADAM2Q99965 735 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 PAK1IP1Q9NWT1 392 aaPredicted RBP13.71□□□□□ -0.22
SMC5-201ENST00000361138 NFKBIL1Q9UBC1 381 aaPredicted RBP13.71□□□□□ -0.22
SMC5-201ENST00000361138 SEC14L3Q9UDX4 400 aa13.71□□□□□ -0.22
SMC5-201ENST00000361138 HPGDP15428 266 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 HDCP19113 662 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 RPIAP49247 311 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 RUNDC3AQ59EK9 446 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 KIAA1614Q5VZ46 1190 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 OOSP2Q86WS3 158 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 FUNDC2Q9BWH2 189 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 MND1Q9BWT6 205 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 PIGVQ9NUD9 493 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 GIMAP2Q9UG22 337 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 PCDHGA7Q9Y5G6 932 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 HTR3EA5X5Y0 456 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 XYLBO75191 536 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 CCNDBP1O95273 360 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 ESR1P03372 595 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 TUFMP49411 452 aaKnown RBP13.7□□□□□ -0.22
SMC5-201ENST00000361138 IL10RBQ08334 325 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 ARMC6Q6NXE6 501 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 RNF180Q86T96 592 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 TRIM48Q8IWZ4 208 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 WDTC1Q8N5D0 677 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 GOLM1Q8NBJ4 401 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 MOCOSQ96EN8 888 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 COL21A1Q96P44 957 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 NECTIN3Q9NQS3 549 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 INTS7Q9NVH2 962 aaKnown RBP13.7□□□□□ -0.22
SMC5-201ENST00000361138 OAS3Q9Y6K5 1087 aaKnown RBP13.7□□□□□ -0.22
SMC5-201ENST00000361138 PTGER3P43115 390 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 GNG2P59768 71 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 RAET1EQ8TD07 263 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 GPR152Q8TDT2 470 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 KCTD7Q96MP8 289 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 FRMD6Q96NE9 622 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 KCNN2Q9H2S1 579 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 TTYH1Q9H313 450 aaPredicted RBP13.7□□□□□ -0.22
SMC5-201ENST00000361138 TM9SF3Q9HD45 589 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 SLITRK5O94991 958 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 MAPK12P53778 367 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 MS4A2Q01362 244 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 KLHL22Q53GT1 634 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 TMEM199Q8N511 208 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 NFKBIZQ9BYH8 718 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 TBC1D17Q9HA65 648 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 ERVK-18Q9QC07 812 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 FKBPLQ9UIM3 349 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 RBM47A0AV96 593 aaKnown RBP13.7□□□□□ -0.22
SMC5-201ENST00000361138 OXSR1O95747 527 aaPredicted RBP13.7□□□□□ -0.22
SMC5-201ENST00000361138 BRCC3P46736 316 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 OMPP47874 163 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 IDNKQ5T6J7 187 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 ZNF730Q6ZMV8 503 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 DCDC5Q6ZRR9 648 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 CIPCQ9C0C6 399 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 LHPPQ9H008 270 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 UCKL1Q9NWZ5 548 aa13.7□□□□□ -0.22
SMC5-201ENST00000361138 XPNPEP2O43895 674 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 FPR1P21462 350 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 BEX3Q00994 111 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 CSTF1Q05048 431 aaKnown RBP13.69□□□□□ -0.22
SMC5-201ENST00000361138 NOMO2Q5JPE7 1267 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 NANOGP8Q6NSW7 305 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 FAM117BQ6P1L5 589 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 NANOGQ9H9S0 305 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 INSIG1O15503 277 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 HTR1EP28566 365 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 TXNL4AP83876 142 aaKnown RBP13.69□□□□□ -0.22
SMC5-201ENST00000361138 MAB21L1Q13394 359 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 SIRPB2Q5JXA9 342 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 TMEM169Q96HH4 297 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 PHOX2BQ99453 314 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 RGPD2P0DJD1 1756 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 RFPL2O75678 378 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 ALDH1A2O94788 518 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 G6PDP11413 515 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 NFKB2Q00653 900 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 TREML2Q5T2D2 321 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms