RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 NEDD8Q15843 81 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 SMU1Q2TAY7 513 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 PYCR3Q53H96 274 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 PSAPL1Q6NUJ1 521 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 LETMD1Q6P1Q0 360 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 SYCE2Q6PIF2 218 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 CMTM8Q8IZV2 173 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 CFAP52Q8N1V2 620 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 OR7D4Q8NG98 312 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 OR52B6Q8NGF0 335 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 OR52E4Q8NGH9 312 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 GIPC3Q8TF64 312 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 HDAC2Q92769 488 aaKnown RBP12.16□□□□□ -0.46
UBA3-202ENST00000361055 ESAMQ96AP7 390 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 COX4I2Q96KJ9 171 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 PPM1MQ96MI6 270 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 GAS2L1Q99501 681 aaPredicted RBP12.16□□□□□ -0.46
UBA3-202ENST00000361055 SPON2Q9BUD6 331 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 TDRD1Q9BXT4 1180 aaKnown RBP12.16□□□□□ -0.46
UBA3-202ENST00000361055 ADGRE3Q9BY15 652 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 ACTL8Q9H568 366 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 GPN2Q9H9Y4 310 aaPredicted RBP12.16□□□□□ -0.46
UBA3-202ENST00000361055 PALMDQ9NP74 551 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 SMPD4Q9NXE4 827 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 DHRS7Q9Y394 339 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 ANKRD66B4E2M5 251 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 LSM1O15116 133 aaKnown RBP12.16□□□□□ -0.46
UBA3-202ENST00000361055 OR1I1O60431 355 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 ACSL4O60488 711 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 CAPN1P07384 714 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 IRF1P10914 325 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 MSH3P20585 1137 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 MATN1P21941 496 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 IGFBP4P22692 258 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 EEF1B2P24534 225 aaKnown RBP12.16□□□□□ -0.46
UBA3-202ENST00000361055 SOX11P35716 441 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 YAP1P46937 504 aaKnown RBP12.16□□□□□ -0.46
UBA3-202ENST00000361055 SLC11A2P49281 568 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 OXCT1P55809 520 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 KIAA0040Q15053 153 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 AP5B1Q2VPB7 878 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 ZIK1Q3SY52 487 aaPredicted RBP12.16□□□□□ -0.46
UBA3-202ENST00000361055 CROCCQ5TZA2 2017 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 TMEM214Q6NUQ4 689 aaKnown RBP12.16□□□□□ -0.46
UBA3-202ENST00000361055 IL27RAQ6UWB1 636 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 STK32CQ86UX6 486 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 ZDHHC13Q8IUH4 622 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 HOMEZQ8IX15 550 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 STK40Q8N2I9 435 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 CARNMT1Q8N4J0 409 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 DDHD1Q8NEL9 900 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 ACDQ96AP0 544 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 PLEKHA8Q96JA3 519 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 MAGED4Q96JG8 741 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 NAA50Q9GZZ1 169 aaKnown RBP12.16□□□□□ -0.46
UBA3-202ENST00000361055 ING2Q9H160 280 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 DNAJB9Q9UBS3 223 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 AP3M1Q9Y2T2 418 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 ASB1Q9Y576 335 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 ACTL7AQ9Y615 435 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 G3V2T6 193 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 STX7O15400 261 aaKnown RBP12.15□□□□□ -0.46
UBA3-202ENST00000361055 KCNH1O95259 989 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 LATS1O95835 1130 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 CRHBPP24387 322 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 GSTM2P28161 218 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 ELK4P28324 431 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 CORO1AP31146 461 aaKnown RBP12.15□□□□□ -0.46
UBA3-202ENST00000361055 SHMT2P34897 504 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 MTHFRP42898 656 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 ZXDBP98169 803 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 SELPLGQ14242 412 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 ZRANB3Q5FWF4 1079 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 CHST15Q7LFX5 561 aaPredicted RBP12.15□□□□□ -0.46
UBA3-202ENST00000361055 DENND1CQ8IV53 801 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 CPNE9Q8IYJ1 553 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 C8orf59Q8N0T1 100 aaPredicted RBP12.15□□□□□ -0.46
UBA3-202ENST00000361055 CLEC4FQ8N1N0 589 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 ADAMTS19Q8TE59 1207 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 RAB2BQ8WUD1 216 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 SNX19Q92543 992 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 TANKQ92844 425 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 POP5Q969H6 163 aaKnown RBP12.15□□□□□ -0.46
UBA3-202ENST00000361055 PPP3R2Q96LZ3 170 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 FEM1AQ9BSK4 669 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 FANCEQ9HB96 536 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 FAM118AQ9NWS6 357 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 CLDND1Q9NY35 253 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 USE1Q9NZ43 259 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 CLEC1BQ9P126 229 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 FKBPLQ9UIM3 349 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 AGO1Q9UL18 857 aaKnown RBP12.15□□□□□ -0.46
UBA3-202ENST00000361055 PSME2Q9UL46 239 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 ZNF711Q9Y462 761 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 RAI2Q9Y5P3 530 aa12.15□□□□□ -0.46
UBA3-202ENST00000361055 ZFC3H1O60293 1989 aaKnown RBP12.15□□□□□ -0.46
UBA3-202ENST00000361055 ILVBLA1L0T0 632 aa12.15□□□□□ -0.47
UBA3-202ENST00000361055 GOLGA8CPA6NN73 597 aa12.15□□□□□ -0.47
UBA3-202ENST00000361055 E5RI56 91 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms