RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 PARVAQ9NVD7 372 aa5.71□□□□□ -1.49
CDC42SE2-201ENST00000360515 FEZ2Q9UHY8 353 aaPredicted RBP5.71□□□□□ -1.49
CDC42SE2-201ENST00000360515 KIAA1549Q9HCM3 1950 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 FAM47E-STBD1D6RA91 191 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 UNC5CO95185 931 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 EEF1GP26641 437 aaKnown RBP5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 PREPP48147 710 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 ITGA9Q13797 1035 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 GALNT3Q14435 633 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 BECN1Q14457 450 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 HIBCHQ6NVY1 386 aaPredicted RBP5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 ZUFSPQ96AP4 578 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 ZNF354BQ96LW1 612 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 ZNF559Q9BR84 538 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 SLC25A51Q9H1U9 297 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 NDST4Q9H3R1 872 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 ZWILCHQ9H900 591 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 ACTR10Q9NZ32 417 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 ICKQ9UPZ9 632 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 FHOD1Q9Y613 1164 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 LRRC10BA6NIK2 292 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 DESP17661 470 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 USP8P40818 1118 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 PRKCIP41743 596 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 MEF2AQ02078 507 aaPredicted RBP5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 TCEAL1Q15170 157 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 NFKBIBQ15653 356 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 POMZP3Q6PJE2 187 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 KDELC1Q6UW63 502 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 PAQR7Q86WK9 346 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 TBC1D21Q8IYX1 336 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 OR1N1Q8NGS0 311 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 SLC30A5Q8TAD4 765 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 CPA5Q8WXQ8 436 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 SMPDL3BQ92485 455 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 TP63Q9H3D4 680 aaPredicted RBP5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 IFT80Q9P2H3 777 aaPredicted RBP5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 MOSPD1Q9UJG1 213 aa5.71□□□□□ -1.5
CDC42SE2-201ENST00000360515 OR6C74A6NCV1 312 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 OR52A4PA6NMU1 304 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 SLC25A14O95258 325 aaPredicted RBP5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 ATP1A1P05023 1023 aaKnown RBP5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 CD46P15529 392 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 CD53P19397 219 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 HLA-DPA1P20036 260 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 IL10P22301 178 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 PEBP1P30086 187 aaKnown RBP5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 PKLRP30613 574 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 OTX2P32243 289 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 MEOX1P50221 254 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 MPP1Q00013 466 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 TUBA3CQ13748 450 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 INSCQ1MX18 579 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 ZNF648Q5T619 568 aaPredicted RBP5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 NCBP2-AS2Q69YL0 99 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 TUBA3EQ6PEY2 450 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 MILR1Q7Z6M3 343 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 CATSPER1Q8NEC5 780 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 UCN2Q96RP3 112 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 SH3GL2Q99962 352 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 REPIN1Q9BWE0 567 aaKnown RBP5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 CLK4Q9HAZ1 481 aaKnown RBP5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 EURLQ9NYK6 297 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 LUZP4Q9P127 313 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 B4GALT7Q9UBV7 327 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 ATP6V1DQ9Y5K8 247 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 SETD2Q9BYW2 2564 aaPredicted RBP5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 A6NNC1 897 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 POP7O75817 140 aaKnown RBP5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 ZNF189O75820 626 aaPredicted RBP5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 AP2A1O95782 977 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 NDST3O95803 873 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 MAPK9P45984 424 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 DSG2Q14126 1118 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 SKOR2Q2VWA4 1001 aaPredicted RBP5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 TMCO3Q6UWJ1 677 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 ZNF227Q86WZ6 799 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 CLYBLQ8N0X4 340 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 ATPAF2Q8N5M1 289 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 TRIM11Q96F44 468 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 THOC3Q96J01 351 aaKnown RBP5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 NDC1Q9BTX1 674 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 ISCUQ9H1K1 167 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 ZDHHC11Q9H8X9 412 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 PCDH18Q9HCL0 1135 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 FAM60AQ9NP50 221 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 IL26Q9NPH9 171 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 ADAM22Q9P0K1 906 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 CD84Q9UIB8 345 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 TRGV8A0A0C4DH27 118 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 FAM237BA0A1B0GVD1 139 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 DYTNA2CJ06 578 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 MAP3K7O43318 606 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 GLSO94925 669 aaPredicted RBP5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 ACPPP15309 386 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 UGT2B7P16662 529 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 ZNF165P49910 485 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 XIAPP98170 497 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 CDKAL1Q5VV42 579 aa5.7□□□□□ -1.5
CDC42SE2-201ENST00000360515 SLC9A4Q6AI14 798 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms