RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 PIWIL4Q7Z3Z4 852 aaKnown RBP18.62■□□□□ 0.57
HLA-DRB1-201ENST00000360004 B3GNT8Q7Z7M8 397 aa18.62■□□□□ 0.57
HLA-DRB1-201ENST00000360004 CACTIN-AS1Q8N1I8 211 aa18.62■□□□□ 0.57
HLA-DRB1-201ENST00000360004 EEF1AKMT1Q8WVE0 214 aa18.62■□□□□ 0.57
HLA-DRB1-201ENST00000360004 UBLCP1Q8WVY7 318 aaPredicted RBP18.62■□□□□ 0.57
HLA-DRB1-201ENST00000360004 OLFM1Q99784 485 aa18.62■□□□□ 0.57
HLA-DRB1-201ENST00000360004 CCDC77Q9BR77 488 aa18.62■□□□□ 0.57
HLA-DRB1-201ENST00000360004 RAB11FIP5Q9BXF6 653 aa18.62■□□□□ 0.57
HLA-DRB1-201ENST00000360004 GPAMQ9HCL2 828 aa18.62■□□□□ 0.57
HLA-DRB1-201ENST00000360004 TMEM9Q9P0T7 183 aa18.62■□□□□ 0.57
HLA-DRB1-201ENST00000360004 LNPEPQ9UIQ6 1025 aa18.62■□□□□ 0.57
HLA-DRB1-201ENST00000360004 MED16Q9Y2X0 877 aa18.62■□□□□ 0.57
HLA-DRB1-201ENST00000360004 ENTPD2Q9Y5L3 495 aa18.62■□□□□ 0.57
HLA-DRB1-201ENST00000360004 ASXL3Q9C0F0 2248 aa18.62■□□□□ 0.57
HLA-DRB1-201ENST00000360004 CCDC187A0A096LP49 1063 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 IGHV5-10-1A0A0J9YXX1 117 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 MATN2O00339 956 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 FAM155BO75949 473 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 C1orf105O95561 183 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 HOXB3P14651 431 aaPredicted RBP18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 STMN1P16949 149 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 CYP2A7P20853 494 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 CD9P21926 228 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 CCKBRP32239 447 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 GFERP55789 205 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 TAS2R39P59534 338 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 SQSTM1Q13501 440 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 TRA2AQ13595 282 aaKnown RBP eCLIP18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 GBX1Q14549 363 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 ERCC6LQ2NKX8 1250 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 C3orf38Q5JPI3 329 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 CCNI2Q6ZMN8 369 aaPredicted RBP18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 UBE2R2Q712K3 238 aaPredicted RBP18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 NKAPQ8N5F7 415 aaKnown RBP18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 RCBTB1Q8NDN9 531 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 CMKLR1Q99788 373 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 CAB39LQ9H9S4 337 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 OGFRQ9NZT2 677 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 ICKQ9UPZ9 632 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 MSRB2Q9Y3D2 182 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 AK5Q9Y6K8 562 aa18.61■□□□□ 0.57
HLA-DRB1-201ENST00000360004 C2orf74A8MZ97 194 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 MAP3K7O43318 606 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 RIPK2O43353 540 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 MATN4O95460 622 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 ITGA2BP08514 1039 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 HIST1H2AGP0C0S8 130 aaPredicted RBP18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 JMJD7P0C870 316 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 MYBL2P10244 700 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 HIST1H2ADP20671 130 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 RAB28P51157 221 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 VSNL1P62760 191 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 FOXK2Q01167 660 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 TSTA3Q13630 321 aaPredicted RBP18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 UBAP2Q5T6F2 1119 aaKnown RBP18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 CACHD1Q5VU97 1274 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 RAB11FIP2Q7L804 512 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 TMPRSS9Q7Z410 1059 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 SLITRK4Q8IW52 837 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 WDR36Q8NI36 951 aaKnown RBP18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 NXPE2Q96DL1 559 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 HIST1H2AHQ96KK5 128 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 GPR22Q99680 433 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 HIST1H2AJQ99878 128 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 H2AFJQ9BTM1 129 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 TRIM54Q9BYV2 358 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 POPDC3Q9HBV1 291 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 LOXL2Q9Y4K0 774 aa18.6■□□□□ 0.57
HLA-DRB1-201ENST00000360004 MN1Q10571 1320 aaPredicted RBP18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 PIPSLA2A3N6 862 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 ARHGEF33A8MVX0 844 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 ISM1B1AKI9 464 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 BTN3A1O00481 513 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 RASGRF2O14827 1237 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 PSIP1O75475 530 aaKnown RBP18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 C8GP07360 202 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 ABHD2P08910 425 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 THRAP10827 490 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 CDH3P22223 829 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 SEPHS1P49903 392 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 SERPINB9P50453 376 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 PGGT1BP53609 377 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 CFHR1Q03591 330 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 ZFP36L1Q07352 338 aaKnown RBP18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 EIF3IQ13347 325 aaKnown RBP18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 ZNF460Q14592 562 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 MROH9Q5TGP6 573 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 ZNF574Q6ZN55 896 aaPredicted RBP18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 TAX1BP1Q86VP1 789 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 FAM129CQ86XR2 697 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 FBXO39Q8N4B4 442 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 AGBL5Q8NDL9 886 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 MCOLN3Q8TDD5 553 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 LIN37Q96GY3 246 aaPredicted RBP18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 PAFAH2Q99487 392 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 OR6C2Q9NZP2 312 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 SATB2Q9UPW6 733 aa18.59■□□□□ 0.57
HLA-DRB1-201ENST00000360004 ZNF839A8K0R7 811 aa18.58■□□□□ 0.56
HLA-DRB1-201ENST00000360004 BTN3A3O00478 584 aa18.58■□□□□ 0.56
HLA-DRB1-201ENST00000360004 HGSO14964 777 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms