RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 APCDD1Q8J025 514 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 BPIFB6Q8NFQ5 453 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 TBC1D15Q8TC07 691 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 SGCDQ92629 289 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 MBOAT4Q96T53 435 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 CLSTN3Q9BQT9 956 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 HTATIP2Q9BUP3 242 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 NTMT1Q9BV86 223 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 C2orf49Q9BVC5 232 aaPredicted RBP8.4□□□□□ -1.06
RFX3-202ENST00000358730 PARVBQ9HBI1 364 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 SLC6A13Q9NSD5 602 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 FAM118AQ9NWS6 357 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 C1orf109Q9NX04 203 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 STOML2Q9UJZ1 356 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 PCDHGA8Q9Y5G5 932 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 BACE2Q9Y5Z0 518 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 SCN5AQ14524 2016 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 TRBV5-4A0A0C4DH59 114 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 ARVCFO00192 962 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 HS6ST1O60243 411 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 STK16O75716 305 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 SCELO95171 688 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 BCKDHAP12694 445 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 ZNF182P17025 639 aaPredicted RBP8.4□□□□□ -1.06
RFX3-202ENST00000358730 EPS8Q12929 822 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 NFATC3Q12968 1075 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 ANKDD1AQ495B1 522 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 LYPLAL1Q5VWZ2 237 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 ANKRD34AQ69YU3 496 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 XAF1Q6GPH4 301 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 XKR5Q6UX68 686 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 MACC1Q6ZN28 852 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 TPGS1Q6ZTW0 290 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 TSPAN33Q86UF1 283 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 GALNT13Q8IUC8 556 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 EID3Q8N140 333 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 NXPE1Q8N323 547 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 SVOPLQ8N434 492 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 ZNF461Q8TAF7 563 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 USP7Q93009 1102 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 ALG14Q96F25 216 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 RBM4BQ9BQ04 359 aaKnown RBP8.4□□□□□ -1.06
RFX3-202ENST00000358730 RBM4Q9BWF3 364 aaKnown RBP8.4□□□□□ -1.06
RFX3-202ENST00000358730 OSBPL10Q9BXB5 764 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 ACPTQ9BZG2 426 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 AMBRA1Q9C0C7 1298 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 PAIP1Q9H074 479 aaKnown RBP8.4□□□□□ -1.06
RFX3-202ENST00000358730 TNKS2Q9H2K2 1166 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 TBC1D23Q9NUY8 699 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.4□□□□□ -1.07
RFX3-202ENST00000358730 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.4□□□□□ -1.07
RFX3-202ENST00000358730 FAM220BPB1ANY3 271 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 AREL1O15033 823 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 CREG1O75629 220 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 SEC14L2O76054 403 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 SERPINA1P01009 418 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 KRT6AP02538 564 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 KRT6BP04259 564 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 NRIP1P48552 1158 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 KRT6CP48668 564 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 RPS14P62263 151 aaKnown RBP8.4□□□□□ -1.07
RFX3-202ENST00000358730 GRSF1Q12849 480 aaKnown RBP eCLIP8.4□□□□□ -1.07
RFX3-202ENST00000358730 KCNAB2Q13303 367 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 BFSP2Q13515 415 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 PON2Q15165 354 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 MEP1AQ16819 746 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 USP39Q53GS9 565 aaKnown RBP8.4□□□□□ -1.07
RFX3-202ENST00000358730 RUNDC3AQ59EK9 446 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 RETSATQ6NUM9 610 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 RNF165Q6ZSG1 346 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 GPR149Q86SP6 731 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 ANKRD46Q86W74 232 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 CHDHQ8NE62 594 aaPredicted RBP8.4□□□□□ -1.07
RFX3-202ENST00000358730 SNX19Q92543 992 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 HDAC2Q92769 488 aaKnown RBP8.4□□□□□ -1.07
RFX3-202ENST00000358730 BORCS5Q969J3 196 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 ACDQ96AP0 544 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 FAM120BQ96EK7 910 aaKnown RBP8.4□□□□□ -1.07
RFX3-202ENST00000358730 TRMT2BQ96GJ1 504 aaKnown RBP8.4□□□□□ -1.07
RFX3-202ENST00000358730 CNDP2Q96KP4 475 aaKnown RBP8.4□□□□□ -1.07
RFX3-202ENST00000358730 TSEN34Q9BSV6 310 aaKnown RBP8.4□□□□□ -1.07
RFX3-202ENST00000358730 BEGAINQ9BUH8 593 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 SLC29A3Q9BZD2 475 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 LHPPQ9H008 270 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 ABCG8Q9H221 673 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 KAT8Q9H7Z6 458 aaKnown RBP8.4□□□□□ -1.07
RFX3-202ENST00000358730 IRAK4Q9NWZ3 460 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 ARL15Q9NXU5 204 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 ASIC5Q9NY37 505 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 DNMT3BQ9UBC3 853 aaKnown RBP8.4□□□□□ -1.07
RFX3-202ENST00000358730 BLOC1S6Q9UL45 172 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 DLGAP4Q9Y2H0 992 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 PCDHB14Q9Y5E9 798 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 U3KQV3 271 aa8.4□□□□□ -1.07
RFX3-202ENST00000358730 TRIM64BA6NI03 449 aa8.39□□□□□ -1.07
RFX3-202ENST00000358730 C16orf96A6NNT2 1141 aa8.39□□□□□ -1.07
RFX3-202ENST00000358730 PRRG1O14668 218 aa8.39□□□□□ -1.07
RFX3-202ENST00000358730 SOCS5O75159 536 aa8.39□□□□□ -1.07
RFX3-202ENST00000358730 CLDN9O95484 217 aa8.39□□□□□ -1.07
RFX3-202ENST00000358730 GSNP06396 782 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms